Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0404
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    31   0.004
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    20   9.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   9.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   9.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   9.1  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 31.5 bits (68), Expect = 0.004
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -2

Query: 245 IKIDLEKIVYYNSN*NRRELAVTRFEFFIQKIATY*RACELAGRPPFPSVVVKMYF 78
           + ++ + I  Y +   R +LA    EFF +   +  R CELA +   P   +K++F
Sbjct: 64  VNVNDQNIRRYRTAFTREQLARLEKEFFKENYVSRPRRCELAAQLNLPESTIKVWF 119


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 330 IFVNSVIRNAKLNL*IGPTPAQSIK 256
           IF+N +++ AKL      +P  ++K
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALK 420


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 330 IFVNSVIRNAKLNL*IGPTPAQSIK 256
           IF+N +++ AKL      +P  ++K
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALK 420


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 330 IFVNSVIRNAKLNL*IGPTPAQSIK 256
           IF+N +++ AKL      +P  ++K
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALK 420


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 330 IFVNSVIRNAKLNL*IGPTPAQSIK 256
           IF+N +++ AKL      +P  ++K
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALK 420


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +1

Query: 304 ISYHRIHKNI 333
           ++YHR+H+ I
Sbjct: 399 VNYHRVHRKI 408


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +1

Query: 304 ISYHRIHKNI 333
           ++YHR+H+ I
Sbjct: 124 VNYHRVHRKI 133


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 299 FAFRITEFTKILTFIKSEPRF 361
           F+ +  +   ++TF + EPRF
Sbjct: 105 FSHKALQGAIMITFYRDEPRF 125


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 299 FAFRITEFTKILTFIKSEPRF 361
           F+ +  +   ++TF + EPRF
Sbjct: 265 FSHKALQGAIMITFYRDEPRF 285


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 299 FAFRITEFTKILTFIKSEPRF 361
           F+ +  +   ++TF + EPRF
Sbjct: 265 FSHKALQGAIMITFYRDEPRF 285


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 330 IFVNSVIRNAKL 295
           IF+N +++ AKL
Sbjct: 396 IFINDIVKTAKL 407


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,547
Number of Sequences: 336
Number of extensions: 1602
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)