Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0404
         (441 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071408-1|AAL49030.1|  579|Drosophila melanogaster RE49422p pro...    27   8.6  
AF522192-1|AAN10045.1|  579|Drosophila melanogaster putative cor...    27   8.6  
AF373862-1|AAM21341.1|  579|Drosophila melanogaster Drm corazoni...    27   8.6  
AE014296-2129|AAF49928.2|  579|Drosophila melanogaster CG10698-P...    27   8.6  

>AY071408-1|AAL49030.1|  579|Drosophila melanogaster RE49422p
           protein.
          Length = 579

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 308 RITEFTKILTFIKSEPRFFIFYLKKKPLV 394
           R+   T IL+ + S P+FFIF++ + P V
Sbjct: 242 RLLGGTYILSLVLSLPQFFIFHVARGPFV 270


>AF522192-1|AAN10045.1|  579|Drosophila melanogaster putative
           corazonin receptor protein.
          Length = 579

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 308 RITEFTKILTFIKSEPRFFIFYLKKKPLV 394
           R+   T IL+ + S P+FFIF++ + P V
Sbjct: 242 RLLGGTYILSLVLSLPQFFIFHVARGPFV 270


>AF373862-1|AAM21341.1|  579|Drosophila melanogaster Drm corazonin
           receptor protein.
          Length = 579

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 308 RITEFTKILTFIKSEPRFFIFYLKKKPLV 394
           R+   T IL+ + S P+FFIF++ + P V
Sbjct: 242 RLLGGTYILSLVLSLPQFFIFHVARGPFV 270


>AE014296-2129|AAF49928.2|  579|Drosophila melanogaster CG10698-PA
           protein.
          Length = 579

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 308 RITEFTKILTFIKSEPRFFIFYLKKKPLV 394
           R+   T IL+ + S P+FFIF++ + P V
Sbjct: 242 RLLGGTYILSLVLSLPQFFIFHVARGPFV 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,876,944
Number of Sequences: 53049
Number of extensions: 291691
Number of successful extensions: 600
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)