Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0398
(530 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 171 4e-43
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 166 9e-42
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 166 9e-42
SB_56| Best HMM Match : Actin (HMM E-Value=0) 165 3e-41
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 6e-41
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 1e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 6e-13
SB_54| Best HMM Match : Actin (HMM E-Value=0) 62 3e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 1e-09
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 60 1e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 5e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 42 4e-04
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 33 0.19
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 32 0.25
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 32 0.33
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 32 0.33
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.33
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.44
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.44
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 30 1.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 30 1.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.4
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 1.8
SB_23255| Best HMM Match : Herpes_UL3 (HMM E-Value=0.93) 29 3.1
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 28 4.1
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.1
SB_27147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 28 4.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 28 4.1
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.1
SB_46026| Best HMM Match : Collagen (HMM E-Value=0.00013) 28 5.4
SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 5.4
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 27 7.2
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 27 7.2
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 27 7.2
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 27 7.2
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.2
SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.5
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 27 9.5
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 9.5
SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.5
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 171 bits (415), Expect = 4e-43
Identities = 95/142 (66%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHR 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 AKEVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREK 454
+K P GIV + + V APEEHPVLLTEAP NPK NREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFETFNTPAMYVDIKAVL 520
MTQIMFETFN+PAMYV I+AVL
Sbjct: 120 MTQIMFETFNSPAMYVAIQAVL 141
Score = 71.3 bits (167), Expect = 4e-13
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEH-GIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 166 bits (404), Expect = 9e-42
Identities = 94/142 (66%), Positives = 102/142 (71%), Gaps = 1/142 (0%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHR 277
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 AKEVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREK 454
+K P GIV + + V APEEHPVLLTEAP NPK NREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFETFNTPAMYVDIKAVL 520
MTQIMFETFN+PAMYV I+AVL
Sbjct: 120 MTQIMFETFNSPAMYVAIQAVL 141
Score = 71.3 bits (167), Expect = 4e-13
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEH-GIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 166 bits (404), Expect = 9e-42
Identities = 92/142 (64%), Positives = 102/142 (71%), Gaps = 1/142 (0%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHR 277
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 AKEVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREK 454
+K P GIV + + V APEEHPVLLTEAP NPK NREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFETFNTPAMYVDIKAVL 520
MTQIMFETFN+PAMYV I+AVL
Sbjct: 120 MTQIMFETFNSPAMYVAIQAVL 141
Score = 71.3 bits (167), Expect = 4e-13
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEH-GIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 165 bits (400), Expect = 3e-41
Identities = 93/140 (66%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHRAK 283
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 284 EVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREKMT 460
P GIV + + V APEEHPVLLTEAP NPK NREKMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMT 120
Query: 461 QIMFETFNTPAMYVDIKAVL 520
QIMFETFN+PAMYV I+AVL
Sbjct: 121 QIMFETFNSPAMYVAIQAVL 140
Score = 71.3 bits (167), Expect = 4e-13
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEH-GIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 163 bits (397), Expect = 6e-41
Identities = 92/140 (65%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHRAK 283
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 284 EVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREKMT 460
P GIV + + V APEEHPVLLTEAP NPK NREKMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMT 120
Query: 461 QIMFETFNTPAMYVDIKAVL 520
QIMFETFN+PAMYV I+AVL
Sbjct: 121 QIMFETFNSPAMYVAIQAVL 140
Score = 71.3 bits (167), Expect = 4e-13
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEH-GIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 106 bits (255), Expect = 1e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 44.8 bits (101), Expect = 4e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKH 318
G + YV DEAQSKRGILTLKYPI+H
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEH 73
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 443 NREKMTQIMFETFNTPAMYVDIKAVL 520
N + M +IMFETFN+PAMYV I+AVL
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVL 103
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 70.9 bits (166), Expect = 6e-13
Identities = 51/140 (36%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Frame = +2
Query: 116 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDFM*EMRHRAKEV 289
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD M
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 290 S*PSNTPSNTGIVH*LG--*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREKMT 460
N P + GIV H + S M+ P VLLTE P NP NREKM
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNI--DPRNTKVLLTEPPLNPMKNREKMI 124
Query: 461 QIMFETFNTPAMYVDIKAVL 520
++MFE + +Y+ I+AVL
Sbjct: 125 EVMFENYQFEGVYIAIQAVL 144
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/42 (66%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +2
Query: 398 EEHPVLLTEAP-NPKGNREKMTQIMFETFNTPAMYVDIKAVL 520
E+ PVLLTEAP NPK NRE+M Q+MFE+FN P MYV ++AV+
Sbjct: 2144 EDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVM 2185
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 223
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 223
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 59.7 bits (138), Expect = 1e-09
Identities = 25/41 (60%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Frame = +2
Query: 401 EHPVLLTEAP-NPKGNREKMTQIMFETFNTPAMYVDIKAVL 520
+HPVLLTEAP NP+ NREK ++ FETFN PA+++ ++AVL
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVL 166
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 92 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 238
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 220 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 104
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +2
Query: 404 HPVLLTEAP-NPKGNREKMTQIMFETFNTPAMYVDIKAVLFA 526
HP+L++EA N + REK+T++MFE +N PA ++ +VL A
Sbjct: 34 HPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTA 75
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 464 IMFETFNTPAMYVDIKAVL 520
IMFE FN+PA+YV I+AVL
Sbjct: 1 IMFEAFNSPAVYVAIQAVL 19
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.7 bits (66), Expect = 0.77
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 279 ALCLISYIKSFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTT 124
+L L + I+ + + P W GNT R PAKP+L++P P S T
Sbjct: 512 SLPLDAKIRHYNRLSNQYPKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -2
Query: 268 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
H++ K ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_23255| Best HMM Match : Herpes_UL3 (HMM E-Value=0.93)
Length = 306
Score = 28.7 bits (61), Expect = 3.1
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 247 EGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTPSPA--- 417
E LY A++ RG T+ +HR +L + Y E +PR + A
Sbjct: 121 ERLYYGGHARTPRGDFTMASMREHRGETLLWRACENTAEKLCYGEHARTPRRNFNMANMR 180
Query: 418 -H*GSQPQGQQREDDPDHVRNIQHARHVRRHQSRA 519
H G Q E+ + + N +HAR RR+ + A
Sbjct: 181 EHRGETLIWQACENTAEKLYNNKHARTPRRNFTMA 215
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 115 NFFVAHLE 92
V L+
Sbjct: 152 QVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 115 NFFVAHLE 92
V L+
Sbjct: 152 QVDVLLLD 159
>SB_27147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +1
Query: 208 KAPPSGRDGRYGTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWH 363
KA P DG T GLY R ++ + YP R L GMT + H
Sbjct: 64 KAKPLSHDGIILTGGLYYRGGLEASAKVF-FYYPEARRWEELLGMTTPRFNH 114
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 115 NFFVAHLE 92
V L+
Sbjct: 185 QVDVLLLD 192
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 115 NFFVAHLE 92
V L+
Sbjct: 102 QVDVLLLD 109
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 115 NFFVAHLE 92
V L+
Sbjct: 774 QVDVLLLD 781
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 115 NFFVAHLE 92
V L+
Sbjct: 858 QVDVLLLD 865
>SB_46026| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 174
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 217 PSGRDGRYGTEGLYVRDEAQSKRGILTLKY 306
P G DG YG +GLY D G++ Y
Sbjct: 143 PYGLDGLYGLDGLYGLDGVYGLDGLMGFNY 172
>SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.9 bits (59), Expect = 5.4
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Frame = -3
Query: 396 GAHTQLIVEGMMPNLLPCHPS**TIPVF------DGVFEGQDTSFALCLISYIKSFCPIP 235
GAH I+ M N++ + T P F DG + +L L + I+ + +
Sbjct: 7 GAHRIAIIPEYMINMIMTKKNVTTAPQFRIMARLDGEMRAILKNTSLPLNAKIRQYNRVL 66
Query: 234 TITP*WRGLPTIEGNTARGASSP-AKPALHIPEPLSTTNAATSS 106
W +G T R SS A+P L++P P S T ++ SS
Sbjct: 67 NQYLKWLQQVKDDGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 110 EVAALVVDNGSGMCKAGFAGDDAPRAV 190
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 268 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 210 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 100
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 268 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 268 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 268 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 268 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 268 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 129 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 172
>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 931
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 470 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 513
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -2
Query: 280 CSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNF 110
C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 465 CLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQV 523
Query: 109 FVAHLE 92
V L+
Sbjct: 524 DVLLLD 529
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 116 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 220
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 411
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 78 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 121
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 193 PLDRGKAPPSGRDGRYGTEGLYVRDEAQSKRG 288
P DRG P G G G +G RD + +RG
Sbjct: 10 PGDRGPRGPPGEQGFSGVKGKEGRDGVKGERG 41
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 1196 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1239
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 1860 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1903
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 180 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 223
>SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 70 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 113
>SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 148 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 191
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 286 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 209 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,874,863
Number of Sequences: 59808
Number of extensions: 419689
Number of successful extensions: 1135
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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