Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0398
(530 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 175 1e-45
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 175 1e-45
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 175 1e-45
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 160 3e-41
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 1.6
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 23 4.8
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 23 4.8
EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein. 23 6.4
AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 23 6.4
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 8.4
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 8.4
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 175 bits (425), Expect = 1e-45
Identities = 98/142 (69%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHR 277
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 AKEVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREK 454
+K P GIV + + V APEEHPVLLTEAP NPK NREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFETFNTPAMYVDIKAVL 520
MTQIMFETFNTPAMYV I+AVL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVL 141
Score = 71.3 bits (167), Expect = 2e-14
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEH-GIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 175 bits (425), Expect = 1e-45
Identities = 98/142 (69%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHR 277
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 AKEVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREK 454
+K P GIV + + V APEEHPVLLTEAP NPK NREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFETFNTPAMYVDIKAVL 520
MTQIMFETFNTPAMYV I+AVL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVL 141
Score = 71.3 bits (167), Expect = 2e-14
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEH-GIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 175 bits (425), Expect = 1e-45
Identities = 98/142 (69%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHR 277
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 AKEVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREK 454
+K P GIV + + V APEEHPVLLTEAP NPK NREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFETFNTPAMYVDIKAVL 520
MTQIMFETFNTPAMYV I+AVL
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVL 141
Score = 71.3 bits (167), Expect = 2e-14
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEH-GIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 160 bits (388), Expect = 3e-41
Identities = 89/142 (62%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDFM*EMRHR 277
MCD++ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD +
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 278 AKEVS*PSNTPSNTGIVH*LG*HGRRFGIIPSTMSCV*APEEHPVLLTEAP-NPKGNREK 454
+K P GI+ + + V APEEHPVLLTEAP NPK NREK
Sbjct: 61 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKSNREK 119
Query: 455 MTQIMFETFNTPAMYVDIKAVL 520
MTQIMFETF PA+YV I+AVL
Sbjct: 120 MTQIMFETFAAPAVYVAIQAVL 141
Score = 72.1 bits (169), Expect = 1e-14
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 241 GTEGLYVRDEAQSKRGILTLKYPIKHRNRSLTGMTWKKIWHHTFYNELRVSPRGTP 408
G + YV DEAQSKRGILTLKYPI+H +KIWHHTFYNELRV+P P
Sbjct: 49 GNKDAYVGDEAQSKRGILTLKYPIEH-GIITNWDDMEKIWHHTFYNELRVAPEEHP 103
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.0 bits (52), Expect = 1.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 205 GKAPPSGRDGRYGTEGLYVRDEAQSKRGILTLK 303
G+ P GRDG +G GL + + G+ LK
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLK 376
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 23.4 bits (48), Expect = 4.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 92 FKMCDEEVAALVVDNGSGMC 151
+++C E+ A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 23.4 bits (48), Expect = 4.8
Identities = 16/66 (24%), Positives = 25/66 (37%)
Frame = +1
Query: 319 RNRSLTGMTWKKIWHHTFYNELRVSPRGTPSPAH*GSQPQGQQREDDPDHVRNIQHARHV 498
RN + + I H +F +R PRG S Q + QQR + Q +
Sbjct: 147 RNVEVQAQPEEDIDHSSFVEVVRRKPRGINSGKSSSQQREQQQRSLQQQQQQQQQQQQQQ 206
Query: 499 RRHQSR 516
+ Q +
Sbjct: 207 QEQQQQ 212
>EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 6.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 211 PSHDRGEHGARSIISC 164
P+H RGEHG + C
Sbjct: 121 PNHARGEHGQQPAERC 136
>AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein.
Length = 356
Score = 23.0 bits (47), Expect = 6.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 169 SCETGLAHTGAIVYYQRGNFFVAHLELVFN*IVLL*INKLTCYCTASL 26
S TGLAH + RG +AH +L I++ + LTC C L
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVK--SNLTC-CIGDL 206
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 22.6 bits (46), Expect = 8.4
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 391 SPRG--TPSPAH*GSQPQGQQREDDPDHVRNIQHARHVRRHQSRAL 522
SPR TP P +QPQ QQ++ RN R SRA+
Sbjct: 200 SPRQPPTPLPRRSSAQPQQQQQQQQ----RNQHEQEQPRASTSRAV 241
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 22.6 bits (46), Expect = 8.4
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = +1
Query: 430 QPQGQQREDDPDHVRNIQHARHVRRHQSR 516
QP ++ P H ++ H H H S+
Sbjct: 168 QPSSYHQQQHPGHSQHHHHHHHHHPHHSQ 196
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,572
Number of Sequences: 2352
Number of extensions: 14249
Number of successful extensions: 48
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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