Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0397
         (470 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112080-1|AAI12081.1|  593|Homo sapiens GATA zinc finger domain...    29   8.1  
BC112052-1|AAI12053.1|  593|Homo sapiens GATA zinc finger domain...    29   8.1  
BC069419-1|AAH69419.1|  593|Homo sapiens GATA zinc finger domain...    29   8.1  
AL513523-12|CAH71425.1|  593|Homo sapiens GATA zinc finger domai...    29   8.1  
AF411836-1|AAL39080.1|  593|Homo sapiens transcription repressor...    29   8.1  
AB032976-1|BAA86464.1|  499|Homo sapiens KIAA1150 protein protein.     29   8.1  

>BC112080-1|AAI12081.1|  593|Homo sapiens GATA zinc finger domain
           containing 2B protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 14  SCKNLLRIKTIITKLCRTQLQIFEKQKKNVPNKLA*CNTS 133
           SC +LLR++  +   CRT      KQ+KN       C TS
Sbjct: 408 SCASLLRVEPFVCAQCRTDFTPHWKQEKNGKILCEQCMTS 447


>BC112052-1|AAI12053.1|  593|Homo sapiens GATA zinc finger domain
           containing 2B protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 14  SCKNLLRIKTIITKLCRTQLQIFEKQKKNVPNKLA*CNTS 133
           SC +LLR++  +   CRT      KQ+KN       C TS
Sbjct: 408 SCASLLRVEPFVCAQCRTDFTPHWKQEKNGKILCEQCMTS 447


>BC069419-1|AAH69419.1|  593|Homo sapiens GATA zinc finger domain
           containing 2B protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 14  SCKNLLRIKTIITKLCRTQLQIFEKQKKNVPNKLA*CNTS 133
           SC +LLR++  +   CRT      KQ+KN       C TS
Sbjct: 408 SCASLLRVEPFVCAQCRTDFTPHWKQEKNGKILCEQCMTS 447


>AL513523-12|CAH71425.1|  593|Homo sapiens GATA zinc finger domain
           containing 2B protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 14  SCKNLLRIKTIITKLCRTQLQIFEKQKKNVPNKLA*CNTS 133
           SC +LLR++  +   CRT      KQ+KN       C TS
Sbjct: 408 SCASLLRVEPFVCAQCRTDFTPHWKQEKNGKILCEQCMTS 447


>AF411836-1|AAL39080.1|  593|Homo sapiens transcription repressor
           p66 protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 14  SCKNLLRIKTIITKLCRTQLQIFEKQKKNVPNKLA*CNTS 133
           SC +LLR++  +   CRT      KQ+KN       C TS
Sbjct: 408 SCASLLRVEPFVCAQCRTDFTPHWKQEKNGKILCEQCMTS 447


>AB032976-1|BAA86464.1|  499|Homo sapiens KIAA1150 protein protein.
          Length = 499

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 14  SCKNLLRIKTIITKLCRTQLQIFEKQKKNVPNKLA*CNTS 133
           SC +LLR++  +   CRT      KQ+KN       C TS
Sbjct: 314 SCASLLRVEPFVCAQCRTDFTPHWKQEKNGKILCEQCMTS 353


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,042,330
Number of Sequences: 237096
Number of extensions: 1064556
Number of successful extensions: 1333
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)