Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0397
         (470 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025726-27|AAK73932.2|  383|Caenorhabditis elegans Hypothetical...    28   3.9  
AF101316-4|AAC69229.2|  296|Caenorhabditis elegans Serpentine re...    27   9.0  

>AC025726-27|AAK73932.2|  383|Caenorhabditis elegans Hypothetical
           protein Y71G12B.6 protein.
          Length = 383

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -1

Query: 389 YFGNRRPFFSGDQFNVTFCQFKNMSFSRYFCILNVCVTVQILNYRSSSGSLENSAL 222
           YFGN    F GD F +      N+ F      +    ++   ++ ++S S E+SAL
Sbjct: 285 YFGNETDSFEGDCFTLRTNMATNLYFPWLLASIAEKFSLHFTHFGNTSMSQESSAL 340


>AF101316-4|AAC69229.2|  296|Caenorhabditis elegans Serpentine
           receptor, class sx protein8 protein.
          Length = 296

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 317 SFSRYFCILNVCVTVQIL 264
           SF++ FCILN C+ V ++
Sbjct: 49  SFAQVFCILNSCIDVYLM 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,344,120
Number of Sequences: 27780
Number of extensions: 198549
Number of successful extensions: 392
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)