Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0396
         (452 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95632-1|CAA64885.1|  475|Homo sapiens Arg protein tyrosine kina...    29   7.4  
U31089-1|AAA75446.1|  390|Homo sapiens Abl binding protein 3 pro...    29   7.4  
U23435-1|AAA92289.1|  401|Homo sapiens Abl interactor 2 protein.       29   7.4  
BT009920-1|AAP88922.1|  475|Homo sapiens abl-interactor 2 protein.     29   7.4  
BC001439-1|AAH01439.1|  475|Homo sapiens abl interactor 2 protein.     29   7.4  
AC018891-1|AAY14675.1|  321|Homo sapiens unknown protein.              29   7.4  

>X95632-1|CAA64885.1|  475|Homo sapiens Arg protein tyrosine
           kinase-binding protein protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 305 VAVVTSPNPRVYPKHPVSHYPLQLNNSIHT 394
           +AV T   P V+P HPV  Y +    S HT
Sbjct: 265 IAVPTPSPPSVFPGHPVQFYSMNRPASRHT 294


>U31089-1|AAA75446.1|  390|Homo sapiens Abl binding protein 3
           protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 305 VAVVTSPNPRVYPKHPVSHYPLQLNNSIHT 394
           +AV T   P V+P HPV  Y +    S HT
Sbjct: 180 IAVPTPSPPSVFPGHPVQFYSMNRPASRHT 209


>U23435-1|AAA92289.1|  401|Homo sapiens Abl interactor 2 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 305 VAVVTSPNPRVYPKHPVSHYPLQLNNSIHT 394
           +AV T   P V+P HPV  Y +    S HT
Sbjct: 220 IAVPTPSPPSVFPGHPVQFYSMNRPASRHT 249


>BT009920-1|AAP88922.1|  475|Homo sapiens abl-interactor 2 protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 305 VAVVTSPNPRVYPKHPVSHYPLQLNNSIHT 394
           +AV T   P V+P HPV  Y +    S HT
Sbjct: 265 IAVPTPSPPSVFPGHPVQFYSMNRPASRHT 294


>BC001439-1|AAH01439.1|  475|Homo sapiens abl interactor 2 protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 305 VAVVTSPNPRVYPKHPVSHYPLQLNNSIHT 394
           +AV T   P V+P HPV  Y +    S HT
Sbjct: 265 IAVPTPSPPSVFPGHPVQFYSMNRPASRHT 294


>AC018891-1|AAY14675.1|  321|Homo sapiens unknown protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 305 VAVVTSPNPRVYPKHPVSHYPLQLNNSIHT 394
           +AV T   P V+P HPV  Y +    S HT
Sbjct: 111 IAVPTPSPPSVFPGHPVQFYSMNRPASRHT 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,815,781
Number of Sequences: 237096
Number of extensions: 1124449
Number of successful extensions: 2026
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2026
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)