Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0391
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   5.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   5.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.8  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 351 STEEEDERLKQRPADIDADVREMERRKR 434
           + EE+DE   ++PA +   V+E+  R R
Sbjct: 475 AVEEDDEDAIEKPAPVKISVQEVLNRVR 502


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 301 EWLRRTQRRSRTAPDP 348
           EW+++T  +S+  P+P
Sbjct: 125 EWIKKTSYQSQPNPEP 140


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 301 EWLRRTQRRSRTAPDP 348
           EW+++T  +S+  P+P
Sbjct: 125 EWIKKTSYQSQPNPEP 140


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 311 DGLRDDPERHRTPV 352
           +GLRD P ++ TP+
Sbjct: 53  EGLRDCPRKYSTPL 66


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 311 DGLRDDPERHRTPV 352
           +GLRD P ++ TP+
Sbjct: 49  EGLRDCPRKYSTPL 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,834
Number of Sequences: 336
Number of extensions: 3923
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)