Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0391
(731 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27) 56 3e-08
SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12) 40 0.002
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 36 0.026
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 31 0.73
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 31 0.96
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_31615| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.053) 31 1.3
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 30 1.7
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 30 1.7
SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 30 1.7
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 30 2.2
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 30 2.2
SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8) 29 2.9
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 29 2.9
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_22151| Best HMM Match : MORN (HMM E-Value=6) 29 2.9
SB_15652| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 29 3.9
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_31603| Best HMM Match : DUF1279 (HMM E-Value=0.51) 29 3.9
SB_11337| Best HMM Match : Bim_N (HMM E-Value=0.45) 29 5.1
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_45968| Best HMM Match : DUF1279 (HMM E-Value=1.2) 28 6.8
SB_40000| Best HMM Match : Pox_A32 (HMM E-Value=0.053) 28 6.8
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 6.8
SB_38001| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 6.8
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_47384| Best HMM Match : Pox_A32 (HMM E-Value=0.029) 28 6.8
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 6.8
SB_16680| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24) 28 6.8
SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8) 25 8.0
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 28 9.0
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 28 9.0
SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1) 28 9.0
SB_7420| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 28 9.0
SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5) 28 9.0
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 28 9.0
SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018) 28 9.0
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22) 28 9.0
SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) 28 9.0
>SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27)
Length = 468
Score = 56.0 bits (129), Expect = 3e-08
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = +3
Query: 381 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCRGSRRWSAGDC 560
+RP D+ DVR ++ R+RV +++ K+ REELE +++ +H G S G R +
Sbjct: 28 RRPDDVLRDVRGLKLRQRVSLVLNDKVLREELEDIVENFVHNGPRPAS-EGIRTYQ-DFL 85
Query: 561 TPEASGVLAAFCRSTTSEV--SKA*GMRRGEKILRCKLAAVY 680
P SG +A + +++ S + E++LRCKLAAVY
Sbjct: 86 VPSYSGGMAGGMVTPIADIRGSDTLNYSKQERLLRCKLAAVY 127
>SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12)
Length = 716
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 354 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL-DQQMHEGATLRSCR 530
TE+ +R P I+ DVR ++ R+RV ++ ++FREELE ++ G L R
Sbjct: 222 TEKGFDRAISTPDQINRDVRGLKLRQRVSIVLGDEVFREELEEIVGSNSCSPGDPLVLER 281
Query: 531 GSRRWSA 551
RWS+
Sbjct: 282 PPPRWSS 288
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 36.3 bits (80), Expect = 0.026
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = -3
Query: 723 PGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP-P 547
P P+P TSP TR P +P P P P G P P ++P P
Sbjct: 120 PSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAP 179
Query: 546 TISLILCRSGASPPRASAGRGPVP 475
+ L + ASPP S G P P
Sbjct: 180 AVPL----AAASPPPPSGGPPPPP 199
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 351 STEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 482
+T+EE ER K + D++ E ER+KR EA + REE ER
Sbjct: 411 TTDEEKERKKSETKNKDSEDEEKERKKR-EAEEEEERRREEEER 453
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -3
Query: 636 SYP--MPSIPRMSLIGRTQLG-PLRLPVCSLPPTISLILCRSGASPPRASAGRGPVPILR 466
SYP +PS + I R + G PL +P SLPPT+S + S PR P R
Sbjct: 423 SYPTNVPSSAAIDTILRDEFGVPLEIP-SSLPPTLSPLASTQPVSTPRQQRRTPPSFTPR 481
Query: 465 GTASR 451
+ SR
Sbjct: 482 SSISR 486
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -3
Query: 414 RGHRR-RCRPDAASSARLPPRWTGVRCRSGSSLSPSQPFRQLESIDLSSKTWVSIR*HES 238
R HR+ R R ++ S +R P + R RS S P R SSK + S R H
Sbjct: 221 RSHRKSRKRSESRSRSRSPKKSRSAR-RSRSPQKSRSPQRSRSP--RSSKRYRSSRSHRK 277
Query: 237 FRSHARS 217
RSH+RS
Sbjct: 278 HRSHSRS 284
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/79 (31%), Positives = 35/79 (44%)
Frame = +2
Query: 320 RDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLEAVPRRIGTGPRPAD 499
RD P P R R++ + R RRR P N +P RSS + +R T P P
Sbjct: 910 RDSPTPSPPPRRR--RKSPSPSPPRRRRRSPSN-SPPPMRSSPLPPPQRKRASTPPSPRR 966
Query: 500 ARGGDAPLLQRIKEMVGGR 556
AR A ++ ++ GR
Sbjct: 967 ARRKVASPEEQDRQKSNGR 985
>SB_31615| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.053)
Length = 870
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 297 VGMAETD-SETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRV 437
+G+ E + E + T P+ E+EDE + + D DA + ++R+KRV
Sbjct: 822 LGILEVELEEPVVEQTNPIDGEDEDEEILEEQQDEDA--KRVKRKKRV 867
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP 550
LP C P P + RRPA + P ++ P + R+ G T+ CS P
Sbjct: 449 LPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 507
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 30.3 bits (65), Expect = 1.7
Identities = 32/102 (31%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = -3
Query: 705 PKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPPTISLILC 526
PK SP +R P + PF P R SL G + P+ PP S
Sbjct: 608 PKHESPSPPSRVPPQPETAPKPFPNITPPEVRPSLPGTPPETKTKPPLAPYPPKTSPKTT 667
Query: 525 RSGASPPRASAGRGPVPILRGTASRT*ELRRA--SGVPFRGH 406
PP S P P L AS+ R A SG P R H
Sbjct: 668 PKPHIPPAPSR---PPPQLPPEASKAVPTRLAAGSGSPARIH 706
>SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = -3
Query: 717 CCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPP 547
C P Q+ + G PP S P S+P S+ G + P +P S+PP
Sbjct: 1043 CATLPPQSIPGASIPPQSIPGAFLPPQSIPGASLPPQSIPG-ASISPQSIPGASIPP 1098
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP 550
LP C P P + RRPA + P ++ P + R+ G T+ CS P
Sbjct: 492 LPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 550
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP 550
LP C P P + RRPA + P ++ P + R+ G T+ CS P
Sbjct: 416 LPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 474
>SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 223
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP 550
LP C P P + RRPA + P ++ P + R+ G T+ CS P
Sbjct: 109 LPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 167
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP 550
LP C P P + RRPA + P ++ P + R+ G T+ CS P
Sbjct: 473 LPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 531
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/113 (24%), Positives = 39/113 (34%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPP 547
LP C P P + R+PA + P ++ P + R+ G T+ CS P
Sbjct: 460 LPHCFPRPDDVTEASNERQPALQNKTRPNYTSPTTNAARIVNEGCTKPASKHDVTCSCP- 518
Query: 546 TISLILCRSGASPPRASAGRGPVPILRGTASRT*ELRRASGVPFRGHRRRCRP 388
+ +PPR S P T + L R S F R P
Sbjct: 519 -------QRETTPPRPSELPFPCTPANNTKMKAWLLNRYSSSTFNTCPHRALP 564
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP 550
LP C P P + RRPA + P ++ P + R+ G T+ CS P
Sbjct: 550 LPHCFPRPGDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 608
>SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8)
Length = 304
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP 550
LP C P P RRPA + P ++ P + R+ G T+ CS P
Sbjct: 24 LPHCFPRPDDVTEPSNERRPASQNKTCPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 82
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/113 (24%), Positives = 39/113 (34%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPP 547
LP C P P + R+PA + P ++ P + R+ G T+ CS P
Sbjct: 465 LPHCFPRPDDVTEASNERQPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP- 523
Query: 546 TISLILCRSGASPPRASAGRGPVPILRGTASRT*ELRRASGVPFRGHRRRCRP 388
+ +PPR S P T + L R S F R P
Sbjct: 524 -------QRETTPPRPSELPFPCTPANNTKMKAWLLNRYSSSTFNTCPHRALP 569
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/113 (24%), Positives = 39/113 (34%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPP 547
LP C P P + R+PA + P ++ P + R+ G T+ CS P
Sbjct: 3 LPHCFPRPDDVTEASNERQPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP- 61
Query: 546 TISLILCRSGASPPRASAGRGPVPILRGTASRT*ELRRASGVPFRGHRRRCRP 388
+ +PPR S P T + L R S F R P
Sbjct: 62 -------QRETTPPRPSELPFPCTPANNTKMKAWLLNRYSSSTFNTCPHRALP 107
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 360 EEDERLKQRPADIDADVREMERRKRV-----EALMSSKLFREELERVLDQQMHEGATLRS 524
++DE L+ + DA E+E KR E L S +REELE+ ++ + E LR+
Sbjct: 2244 KKDELLQAEKENDDAKA-ELESLKRKFLELGEELAHSGKYREELEKRFEELVSEKNVLRA 2302
Query: 525 C-RGSRRWSAG 554
C SR AG
Sbjct: 2303 CLEESRNKCAG 2313
>SB_22151| Best HMM Match : MORN (HMM E-Value=6)
Length = 186
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCRGS 536
E E R +R +++ REMERR+ +E + RE R ++ E R G
Sbjct: 30 EMERRREMERRREMERR-REMERRREMERRREMERRREMERRREMERRREMERRRERSGV 88
Query: 537 RRWSAGD 557
RWS G+
Sbjct: 89 GRWSGGE 95
>SB_15652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQ 586
LP C P P + RRPA P ++ P P+ R+ G T+
Sbjct: 97 LPHCLPRPDDVTEAHNERRPAPQNEIHPNYNSPTPNAARIVNEGCTE 143
>SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 300
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +1
Query: 94 KCVFLQI*CF-VLSAC-YDRRSN-LCVNFVCSDHLICRYA 204
+CV + I C+ V+ C Y+ S CV+F+ +++CRYA
Sbjct: 157 RCVVMSICCYDVMLLCRYNVTSKYFCVDFLICCYVVCRYA 196
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 325 RSRTAPDPCPPRRKTSA*SSVRPTSTP 405
R + P P PPRRK S S P +TP
Sbjct: 800 RKHSDPPPLPPRRKKSHEDSPSPCTTP 826
>SB_31603| Best HMM Match : DUF1279 (HMM E-Value=0.51)
Length = 161
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 300 GMAETDSETIPNGTGPLSTEEED-ERLKQRPADIDADVREMERRKRVEALMSSKLFREEL 476
G+ TD ETI P S +E ER ++R ++ID E+ER R L + K RE +
Sbjct: 5 GVVATDRETIDGPNTPESRRQEARERNEERLSEID----ELERENR--ELENQKPLRERI 58
Query: 477 ERV 485
+ +
Sbjct: 59 KAI 61
>SB_11337| Best HMM Match : Bim_N (HMM E-Value=0.45)
Length = 286
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = -3
Query: 726 LPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLP 550
LP C P P + R+PA + P ++ P + R+ G T+ CS P
Sbjct: 226 LPHCFPRPDDVTEASNERQPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 284
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 316 TQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCS 465
T + AP PR ++ +S TSTP + SA S PR+ S
Sbjct: 58 TSNSTTRAPSTSTPRAGSTTTTSAPSTSTPRTGSTTTTSAPSTSTPRTGS 107
>SB_45968| Best HMM Match : DUF1279 (HMM E-Value=1.2)
Length = 180
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +3
Query: 300 GMAETDSETI--PNGTGPL---STEEEDERLKQRPADIDADVREMERRK 431
G+ TD ETI PN + + E +ERL +R +++ + RE+E +K
Sbjct: 23 GVVTTDRETIDDPNTSESRRQEARERNEERLSERIEELERENRELENQK 71
>SB_40000| Best HMM Match : Pox_A32 (HMM E-Value=0.053)
Length = 946
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -3
Query: 444 ELRRASGVPFRGHRRRCRPDAASSARLPPRWTGVRCRSGSSLSPSQPFR 298
E R + + RG RR AA+ R + + CRSG S S S+ FR
Sbjct: 820 EPARCNTLDRRGRRRDSARKAAAGGRTADQGSAA-CRSGDSASRSRTFR 867
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 729 SLPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMP 622
S P P P +NR P R P G PP + P P
Sbjct: 237 SRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPP 272
>SB_38001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = -3
Query: 549 PTISLILCRSGASPPRASAGRGPVPILRGTASR----T*ELRRASGVPFRGHRRRCRPDA 382
P S I R SP G P P RGT S+ E+RR S R P +
Sbjct: 40 PQDSQIRPRGSGSPSLQYGGGLPSPARRGTPSKLRAEETEIRRRSLPQVPSSRNSLSPSS 99
Query: 381 ASSARLPPRWTGVR 340
S ++ PR G +
Sbjct: 100 YSDHQITPRGPGTK 113
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 729 SLPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMP 622
S P P P +NR P R P G PP + P P
Sbjct: 149 SRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPP 184
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 314 GLRDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSS 445
G RD R +P H RR+ + R RR R+ +P RR S
Sbjct: 205 GYRDQRRRSHSPAHH--RRSRSRSRSRSPRRRRRSRSPRRRRRS 246
>SB_47384| Best HMM Match : Pox_A32 (HMM E-Value=0.029)
Length = 327
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 393 DIDADVREMERRKRVEALMSSKLFREEL--ERVLDQQMHEGATLRSCRGSRRWSA 551
D A++ E + ++ ++AL + K + + + + G +L + R SRRW+A
Sbjct: 160 DYGAELSEEKMKESMKALKTKKFLNRTMMCDECFESFLEGGGSLPTSRPSRRWNA 214
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 10/45 (22%)
Frame = +2
Query: 353 HRGGRRALEAASGRHRR----------RCPRNGTPEARRSSHVLE 457
H+GG RA + +HRR R PR GTP R ++ E
Sbjct: 873 HKGGNRATQEREKKHRRNQPDKRRTQMRIPRKGTPRKRNQTNPRE 917
>SB_16680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 446 HVLEAVPRRIGTGPRPADARGGDAPLLQR 532
++L A+PRR TGPR +D +G P ++R
Sbjct: 66 NLLMAIPRRPVTGPRASDCKG---PFIER 91
>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
Length = 683
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/80 (20%), Positives = 38/80 (47%)
Frame = +3
Query: 354 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCRG 533
T+ E++ K+ + + ++ E+ K E +SKL ++ + + D Q + + + R
Sbjct: 357 TDTEEKTEKEEKTENEEKPKQKEKEKEKEKRPASKLDKKTQKMIADLQRCKKQMVETRRN 416
Query: 534 SRRWSAGDCTPEASGVLAAF 593
+ R + TP+ L+ +
Sbjct: 417 THRPPTREFTPDIFNSLSPY 436
>SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8)
Length = 355
Score = 25.0 bits (52), Expect(2) = 8.0
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = -3
Query: 687 SPGTRRPACSGVSSPPFSYPMPS--IPRMSLIGRTQLGPLRLPVCSLPPTISLILCRSGA 514
+PG P + V +PP Y + P+MSL + P+ P + +L
Sbjct: 246 TPGAFTPPPAPVFTPPPPYRTTAKPFPKMSLTPTPKKPPVPKKPVLTPAQLEGLLKSPSP 305
Query: 513 SPPRASAGRGPVPILRGTASR 451
P + P P+ R T ++
Sbjct: 306 LPKKKKKTGPPPPVRRSTRNK 326
Score = 21.4 bits (43), Expect(2) = 8.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 342 RCRSGSSLSPSQPFRQL 292
R R+G +P QPFR L
Sbjct: 337 RKRTGGGGAPDQPFRWL 353
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 310 RRTQR-RSRTAPDPCPPRRKTSA*SSVRPTSTPMSAK 417
RR +R R R +P PC P KT A PTS + AK
Sbjct: 163 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 199
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 687 SPGTRRPACSGVSSPPFSYPMPSIPRMS 604
S G+ PA G+++ P S P PS PR++
Sbjct: 881 STGSDIPASPGIANSPASRPSPSRPRIN 908
>SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1)
Length = 762
Score = 27.9 bits (59), Expect = 9.0
Identities = 26/80 (32%), Positives = 33/80 (41%)
Frame = +2
Query: 293 SCRNG*DGLRDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLEAVPRR 472
S R G L P H +P R A A H R +G+P A ++ HVL VP+R
Sbjct: 502 SYRYGGPTLSPSPGPHMSPAGPFSRTARLA---HHESRPQGSGSPSAIKAHHVL-CVPQR 557
Query: 473 IGTGPRPADARGGDAPLLQR 532
GDA +L R
Sbjct: 558 WEMEDILKVLNSGDAIILSR 577
>SB_7420| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 1354
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -3
Query: 720 GCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIP-RMSLIGRTQLGPLRLPVCSLPPT 544
GC P +T+ TR P+ SSPP P P+ P R S + R ++ P P + P
Sbjct: 114 GCRSPPTSPKTACLTRGPSEDNRSSPP-RRPPPAAPHRTSSLSR-KIKPPVPPKPKVMPD 171
Query: 543 ISLILCRSGASPPR 502
+ L R AS R
Sbjct: 172 RAASLSRQSASLSR 185
>SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5)
Length = 1308
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 672 RPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPL 574
RP S S P + MPS+ RM L+ R G +
Sbjct: 1055 RPTVSRTKSTPSALLMPSVERMELVRRKSEGSM 1087
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 330 PNGTGPLSTEEEDERLKQRPADIDADVREMERRKR 434
PNG P+ + RL RPAD+ D E + R
Sbjct: 296 PNGRPPVPRQGPGSRLPPRPADMKPDGEREESKPR 330
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 333 NGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGA 512
N + S E++++ LKQ+ AD+++ R R K A + SKL ++ LD + E A
Sbjct: 1621 NESARASLEKQNKDLKQKLADLESSTR--SRHKMAIASLESKL--TNMQEQLDLETKERA 1676
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 306 AETDSETIPNGTGPLSTEEEDERLKQRP--ADIDADVREMERRKRVEALMSSKLFREELE 479
A++D++ T L E L Q + +D++ EMER++ L+ S+ ELE
Sbjct: 570 ADSDAQKFKKLTKELLALERAYALLQAQVGSTMDSEREEMERQQLQSDLIESQARIHELE 629
Query: 480 RVLD 491
R+LD
Sbjct: 630 RMLD 633
>SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018)
Length = 1066
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Frame = +3
Query: 318 SETIPNGTGPLSTEEEDERL--KQRPADIDADVREMERRKR-VEALMSSKLFREEL---- 476
S T P+ + + ++++ QR +ID E+ER +R +E ++ REEL
Sbjct: 151 SSTTPSKRAAIEAAKLEQKMIALQRRQEIDRRRDELERERRELERSSEREILREELSAAQ 210
Query: 477 --ERVLDQQMHE 506
+R+L+ Q H+
Sbjct: 211 VIQRILEDQPHD 222
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 310 RRTQR-RSRTAPDPCPPRRKTSA*SSVRPTSTPMSAK 417
RR +R R R +P PC P KT A PTS + AK
Sbjct: 163 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 199
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 310 RRTQR-RSRTAPDPCPPRRKTSA*SSVRPTSTPMSAK 417
RR +R R R +P PC P KT A PTS + AK
Sbjct: 434 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 470
>SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22)
Length = 1043
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/46 (21%), Positives = 28/46 (60%)
Frame = +3
Query: 360 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQ 497
++ + +K++ ++ + RE+ER+ VE L ++E++ +L ++
Sbjct: 80 QKQQDIKRQRETLEREQRELERKGEVEKLEEELTAQKEIQSILQEE 125
>SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)
Length = 770
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 52 CLLS*CCKNYKENDKCVFLQI*CFVLSACYDRR-SNLCVNFVCSDHLICRYAGPSAGPCM 228
CL++ KN ++ D+C C ++C + S C + +L+ R++ A M
Sbjct: 395 CLVAKHYKNLQDVDECNGSSHGCPSSASCVNTHGSYYCTGYGAPWNLVARFSNADALNWM 454
Query: 229 TPEGLVLPDTNPGLA*QIN 285
+ +GL D G+ Q+N
Sbjct: 455 SDDGLWWFDLLSGVGDQLN 473
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,658,723
Number of Sequences: 59808
Number of extensions: 571306
Number of successful extensions: 2664
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2650
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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