Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0391
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 47 2e-05
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 47 2e-05
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 47 2e-05
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 47 2e-05
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 47 2e-05
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 47 2e-05
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 47 2e-05
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 34 0.12
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 34 0.12
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 33 0.16
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 33 0.21
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 31 0.84
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 31 1.1
U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like pr... 31 1.1
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.9
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 3.4
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 3.4
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 3.4
U88315-2|AAB42370.2| 434|Caenorhabditis elegans Hypothetical pr... 29 3.4
U88315-1|AAM29668.1| 457|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 3.4
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 5.9
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 5.9
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 7.8
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 28 7.8
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical ... 28 7.8
AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear recep... 28 7.8
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 381 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGAT 515
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 381 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGAT 515
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 381 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGAT 515
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 381 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGAT 515
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 381 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGAT 515
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 381 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGAT 515
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 381 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGAT 515
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 33.9 bits (74), Expect = 0.12
Identities = 27/85 (31%), Positives = 35/85 (41%)
Frame = +3
Query: 309 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 488
E+ I NG L + D R RE ERR+ + SS+ FR+ L +
Sbjct: 100 ESREYVIENGVKRLVNQHYDSRGYSSAGRGQKGRREEERRRNMAVDYSSQDFRQSLAAI- 158
Query: 489 DQQMHEGATLRSCRGSRRWSAGDCT 563
DQ +GA R G R GD T
Sbjct: 159 DQASRDGAISRGEDGVRVRQIGDTT 183
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 33.9 bits (74), Expect = 0.12
Identities = 27/85 (31%), Positives = 35/85 (41%)
Frame = +3
Query: 309 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 488
E+ I NG L + D R RE ERR+ + SS+ FR+ L +
Sbjct: 70 ESREYVIENGVKRLVNQHYDSRGYSSAGRGQKGRREEERRRNMAVDYSSQDFRQSLAAI- 128
Query: 489 DQQMHEGATLRSCRGSRRWSAGDCT 563
DQ +GA R G R GD T
Sbjct: 129 DQASRDGAISRGEDGVRVRQIGDTT 153
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 33.5 bits (73), Expect = 0.16
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = -3
Query: 621 SIPRMSLIGRTQLG------PLRLPVCSLPPTISLILCRSGASPPRASAGRGPVPILRGT 460
+IPR S G +G P RLP + P T L A AS R P+P ++ T
Sbjct: 38 TIPRQSAPGGITIGAAARRPPSRLPTPTTPATGRASLPERSAMAKPASCSR-PIPTMQST 96
Query: 459 ASRT*ELRRASGVPFRGHRRRCRPDAASSAR 367
ASR L AS FR R RP S+ R
Sbjct: 97 ASRISTLTAASS--FR-QLRTGRPPPPSTQR 124
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 33.1 bits (72), Expect = 0.21
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = -3
Query: 621 SIPRMSLIGRTQLG------PLRLPVCSLPPTISLILCRSGASPPRASAGRGPVPILRGT 460
+IPR S G +G P RLP + P T L A AS R P+P ++ T
Sbjct: 38 TIPRQSAPGGITIGAAARRPPSRLPTPTTPATGRASLPERSAMAKPASCSR-PIPTMQST 96
Query: 459 ASRT*ELRRASGVPFRGHRRRCRPDAASSAR 367
ASR L AS FR R RP S+ R
Sbjct: 97 ASRISTLTAAS--TFR-QLRTGRPPPPSTQR 124
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 31.1 bits (67), Expect = 0.84
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 411 REMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCRGSRRWSAGDCT 563
RE ERR+ + SS+ FR+ L + DQ +GA R G R GD T
Sbjct: 16 REEERRRNMAVDYSSQDFRQSLAAI-DQASRDGAISRGEDGVRVRQIGDTT 65
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRKRV-EALMSSKLFREELERVLDQQMHEGA 512
EE+++R K ++ ++E E+RKRV E M K EE + L+ +M E A
Sbjct: 449 EEDEKRRKAEESERVRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMREKA 501
>U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like
protein family protein11 protein.
Length = 394
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = -3
Query: 693 RTSPGTRRPACSGVSSPPFSYP--MPSIPRMSLIGR--TQLGPLRLPVCSLPPTISLILC 526
+T P T+ P ++SP P +P+I +I + + LGP++LP L PT+ IL
Sbjct: 236 KTLPTTKIPDIVPITSPTVKIPQIIPTIKIPDIIPKNLSTLGPIKLPTIKL-PTLPHILP 294
Query: 525 RSGASPPRASAG 490
P + G
Sbjct: 295 TKSPKPTPSHKG 306
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Frame = +2
Query: 293 SCRNG*DGLRDDPE---RHRTPV--HRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLE 457
S R DG R P R R+P H + A+ RRR R E R +H
Sbjct: 412 SSRGAADGPRHSPASRPRPRSPQQSHPAAPHLADLANYEKRRRSEREERRERERQAHHAM 471
Query: 458 AVPRRIGTGPRPADARGGDAPLL 526
+ R + P P +R PLL
Sbjct: 472 PIARVSASVPAPQQSRKMSEPLL 494
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/83 (33%), Positives = 34/83 (40%)
Frame = -3
Query: 723 PGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPPT 544
P +P RT G+ P +G PP + P PR G P P PPT
Sbjct: 258 PPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRA---GSPPPPP---PPRGSPPT 309
Query: 543 ISLILCRSGASPPRASAGRGPVP 475
SL ++G SPP A G P P
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPP 332
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 597 GRTQLGPLRLPVCSLPPTISLILCRSGASPPRASAGRGPVP 475
G+ Q P P PP S L SG+ PP +AG P P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 267
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/83 (33%), Positives = 34/83 (40%)
Frame = -3
Query: 723 PGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPPT 544
P +P RT G+ P +G PP + P PR G P P PPT
Sbjct: 279 PPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRA---GSPPPPP---PPRGSPPT 330
Query: 543 ISLILCRSGASPPRASAGRGPVP 475
SL ++G SPP A G P P
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPP 353
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 597 GRTQLGPLRLPVCSLPPTISLILCRSGASPPRASAGRGPVP 475
G+ Q P P PP S L SG+ PP +AG P P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 288
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/83 (33%), Positives = 34/83 (40%)
Frame = -3
Query: 723 PGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPPT 544
P +P RT G+ P +G PP + P PR G P P PPT
Sbjct: 264 PPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRA---GSPPPPP---PPRGSPPT 315
Query: 543 ISLILCRSGASPPRASAGRGPVP 475
SL ++G SPP A G P P
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPP 338
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 597 GRTQLGPLRLPVCSLPPTISLILCRSGASPPRASAGRGPVP 475
G+ Q P P PP S L SG+ PP +AG P P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 273
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 360 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 479
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRK-RVEALMSSKLFREELERVLDQQMHEGATLRSCRG 533
++E+ER++ I VRE E K R+E L ++ RE+ ER+ ++ E L R
Sbjct: 1172 QQEEERIEMETILISRRVREEEEEKMRLERLRKAEREREQ-ERLKREEEEERKRLEQLRE 1230
Query: 534 SRRWSA 551
+ + A
Sbjct: 1231 AEKLKA 1236
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCRGS 536
E E ERLK+ E E RKR+E L ++ + E+E+ ++++ E T ++
Sbjct: 1208 EREQERLKRE---------EEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALELE 1258
Query: 537 RR 542
R+
Sbjct: 1259 RK 1260
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRK-RVEALMSSKLFREELERVLDQQMHEGATLRSCRG 533
++E+ER++ I VRE E K R+E L ++ RE+ ER+ ++ E L R
Sbjct: 1172 QQEEERIEMETILISRRVREEEEEKMRLERLRKAEREREQ-ERLKREEEEERKRLEQLRE 1230
Query: 534 SRRWSA 551
+ + A
Sbjct: 1231 AEKLKA 1236
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCRGS 536
E E ERLK+ E E RKR+E L ++ + E+E+ ++++ E T ++
Sbjct: 1208 EREQERLKRE---------EEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALELE 1258
Query: 537 RR 542
R+
Sbjct: 1259 RK 1260
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 360 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 479
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 360 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 479
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>U88315-2|AAB42370.2| 434|Caenorhabditis elegans Hypothetical
protein C37H5.6b protein.
Length = 434
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 449 VLEAVPRRIGTGPRPADARGGDAPLLQRIKEMVG 550
V++A R+GTGP P + D LQ I + VG
Sbjct: 273 VVKAYQTRVGTGPFPTELFDSDGEKLQTIGKEVG 306
>U88315-1|AAM29668.1| 457|Caenorhabditis elegans Hypothetical
protein C37H5.6a protein.
Length = 457
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 449 VLEAVPRRIGTGPRPADARGGDAPLLQRIKEMVG 550
V++A R+GTGP P + D LQ I + VG
Sbjct: 296 VVKAYQTRVGTGPFPTELFDSDGEKLQTIGKEVG 329
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRK-RVEALMSSKLFREELERVLDQQMHEGATLRSCRG 533
++E+ER++ I VRE E K R+E L ++ RE+ ER+ ++ E L R
Sbjct: 1172 QQEEERIEMETILISRRVREEEEEKMRLERLRKAEREREQ-ERLKREEEEERKRLEQLRE 1230
Query: 534 SRRWSA 551
+ + A
Sbjct: 1231 AEKLKA 1236
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCRGS 536
E E ERLK+ E E RKR+E L ++ + E+E+ ++++ E T ++
Sbjct: 1208 EREQERLKRE---------EEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALELE 1258
Query: 537 RR 542
R+
Sbjct: 1259 RK 1260
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Frame = -3
Query: 534 ILCRSGASPPRASAGRGPVPILRGTASRT*ELRRASGVPFRGHRRRCRPDAASSARLPPR 355
I C +GA A R P R ++S + R +G P + SS+ P
Sbjct: 22 ITCATGAGSEIALVARDPTTYYRPSSSNSDPTYRETGTPISWSEGGGGLSSTSSSSCPSA 81
Query: 354 WTGVRCRSGSSLSPSQP-------FRQLESIDLSSKTWVSIR*HESFRSHARSS 214
+ SS SP QP R+ S SS ++ + S+ S + SS
Sbjct: 82 SSQFPLILRSSPSPPQPPQQQHAQHREYSSFSFSSSSFTTPSSSSSYSSSSSSS 135
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Frame = -3
Query: 534 ILCRSGASPPRASAGRGPVPILRGTASRT*ELRRASGVPFRGHRRRCRPDAASSARLPPR 355
I C +GA A R P R ++S + R +G P + SS+ P
Sbjct: 22 ITCATGAGSEIALVARDPTTYYRPSSSNSDPTYRETGTPISWSEGGGGLSSTSSSSCPSA 81
Query: 354 WTGVRCRSGSSLSPSQP-------FRQLESIDLSSKTWVSIR*HESFRSHARSS 214
+ SS SP QP R+ S SS ++ + S+ S + SS
Sbjct: 82 SSQFPLILRSSPSPPQPPQQQHAQHREYSSFSFSSSSFTTPSSSSSYSSSSSSS 135
>U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical
protein T14E8.2 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 303 MAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 482
M E D + + N + S EEE+ + + D D +E ERR++ EA R L
Sbjct: 248 MNEKDDDDV-NKSVEESDEEEENQESEEQEDNDKAEKEEERRRQEEAARQHSKRRRTLRH 306
Query: 483 VL 488
+L
Sbjct: 307 LL 308
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 49 RCLLS*CCKNYKENDKCVFLQI*CFVLSACYDRRSNLCVN--FVCSDHLIC 195
RC CK++ + C +Q C + + S+ C+N FVC L C
Sbjct: 231 RCDAEVDCKDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDC 281
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 49 RCLLS*CCKNYKENDKCVFLQI*CFVLSACYDRRSNLCVN--FVCSDHLIC 195
RC CK++ + C +Q C + + S+ C+N FVC L C
Sbjct: 233 RCDAEVDCKDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDC 283
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -3
Query: 507 PRASAGRGPVPILRGTASRT*ELRRASGVPFRGHRRRCRPDAASS 373
PRA+ GPV R A RRA G P R RR R DA S
Sbjct: 89 PRAAPDHGPVQAPRNLAQALNLPRRARGRPRRSDVRRTR-DAQDS 132
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 286 RLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 441
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 286 RLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 441
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.9 bits (59), Expect = 7.8
Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Frame = -3
Query: 630 PMPSIPRMSLIGRTQLGPLRLPVCSLPPTISLILCRSGASPPRASAGRGPVPILRGTASR 451
P P++PR + G+ P + PT + AS PRA R P R T +R
Sbjct: 229 PAPAVPR-PVAGKPSARPATTTGTATRPTRPAV---PAASAPRALTSRAPAGPSRPTTTR 284
Query: 450 T*ELRRASGVPFR---------GHRRRCR-PDAASSARLPPRWTGVRCRSGSSLSPSQPF 301
+ VP R + R P A SA PPR G + ++ + ++P
Sbjct: 285 NAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPR--GAPAKPAANTAKAEPI 342
Query: 300 RQLESI 283
Q +++
Sbjct: 343 AQKKTV 348
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.9 bits (59), Expect = 7.8
Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Frame = -3
Query: 630 PMPSIPRMSLIGRTQLGPLRLPVCSLPPTISLILCRSGASPPRASAGRGPVPILRGTASR 451
P P++PR + G+ P + PT + AS PRA R P R T +R
Sbjct: 229 PAPAVPR-PVAGKPSARPATTTGTATRPTRPAV---PAASAPRALTSRAPAGPSRPTTTR 284
Query: 450 T*ELRRASGVPFR---------GHRRRCR-PDAASSARLPPRWTGVRCRSGSSLSPSQPF 301
+ VP R + R P A SA PPR G + ++ + ++P
Sbjct: 285 NAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPR--GAPAKPAANTAKAEPI 342
Query: 300 RQLESI 283
Q +++
Sbjct: 343 AQKKTV 348
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.9 bits (59), Expect = 7.8
Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Frame = -3
Query: 630 PMPSIPRMSLIGRTQLGPLRLPVCSLPPTISLILCRSGASPPRASAGRGPVPILRGTASR 451
P P++PR + G+ P + PT + AS PRA R P R T +R
Sbjct: 229 PAPAVPR-PVAGKPSARPATTTGTATRPTRPAV---PAASAPRALTSRAPAGPSRPTTTR 284
Query: 450 T*ELRRASGVPFR---------GHRRRCR-PDAASSARLPPRWTGVRCRSGSSLSPSQPF 301
+ VP R + R P A SA PPR G + ++ + ++P
Sbjct: 285 NAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPR--GAPAKPAANTAKAEPI 342
Query: 300 RQLESI 283
Q +++
Sbjct: 343 AQKKTV 348
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCRGS 536
E +++R ++ +D +D E E RKR ++ S K R+ D + + CR S
Sbjct: 157 ERKEKRRRRDDSDDSSDSDEEEDRKRKKSKESKKEKRKRRHSSSDDRSASSDSDDDCRDS 216
Query: 537 RR 542
+R
Sbjct: 217 KR 218
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 720 GCCPNPKQNRTSPGTRRPACSGVSSPPF 637
GCCP P + + + C G SPPF
Sbjct: 313 GCCPVPVNEQPTGMIKITLCPGSYSPPF 340
>AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical
protein Y48C3A.4 protein.
Length = 448
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 666 ACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPPTI 541
A + SSP P P+ P + L T P LP +L PTI
Sbjct: 80 ALAAASSPILPSPTPTFPSLPLFSPTV--PTSLPTPTLTPTI 119
>AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear receptor
NHR-43 protein.
Length = 459
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 669 PACSGVSSPPFSYPMPSIPRMS-LIGRTQLGPLRLPVCSLPPTIS 538
P + S PF + P++P + +IG PL LP S PT++
Sbjct: 6 PVSCVMISGPFLHFDPTVPLQTVMIGHPATSPLSLPSSSSSPTVA 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,614,751
Number of Sequences: 27780
Number of extensions: 409515
Number of successful extensions: 1724
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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