Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0391
(731 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49160.2 68414.m05512 protein kinase family protein contains ... 36 0.037
At1g49160.1 68414.m05511 protein kinase family protein contains ... 36 0.037
At2g16630.1 68415.m01909 proline-rich family protein contains pr... 33 0.20
At5g56890.1 68418.m07099 protein kinase family protein contains ... 31 0.79
At2g36695.1 68415.m04502 expressed protein 31 0.79
At3g27350.1 68416.m03420 expressed protein 31 1.0
At2g40480.1 68415.m04996 expressed protein contains Pfam profile... 31 1.0
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 31 1.0
At4g32020.1 68417.m04558 expressed protein NuLL 30 1.4
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.4
At3g52900.1 68416.m05830 expressed protein contains Pfam profile... 30 1.4
At2g32360.1 68415.m03955 ubiquitin family protein contains INTER... 30 1.4
At1g43760.1 68414.m05034 hypothetical protein 30 1.8
At4g11560.1 68417.m01853 bromo-adjacent homology (BAH) domain-co... 29 2.4
At4g35590.1 68417.m05056 RWP-RK domain-containing protein low si... 29 3.2
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 29 3.2
At5g61560.1 68418.m07725 protein kinase family protein contains ... 29 4.2
At1g27580.1 68414.m03361 F-box family protein similar to F-box p... 29 4.2
At1g27540.1 68414.m03357 F-box family protein similar to F-box p... 29 4.2
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 28 5.6
At3g21350.1 68416.m02696 RNA polymerase transcriptional regulati... 28 5.6
At5g15890.1 68418.m01859 expressed protein 28 7.3
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 28 7.3
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 28 7.3
At3g28790.1 68416.m03593 expressed protein 28 7.3
At2g40935.1 68415.m05053 expressed protein low similarity to PGP... 28 7.3
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 28 7.3
At5g22090.1 68418.m02572 expressed protein 27 9.7
At1g69060.1 68414.m07902 expressed protein 27 9.7
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 27 9.7
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 27 9.7
>At1g49160.2 68414.m05512 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 557
Score = 35.5 bits (78), Expect = 0.037
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +3
Query: 303 MAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMER---RKRVEALMSSK--LFR 467
+A T + G L EEEDERLK+ I+ RE + RKR EA M +K F
Sbjct: 491 VAATTEDQEAEKPGSLEEEEEDERLKEELEKIEERFREEMKEITRKREEATMETKNRFFE 550
Query: 468 EELERV 485
+++++V
Sbjct: 551 KKMQQV 556
>At1g49160.1 68414.m05511 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 539
Score = 35.5 bits (78), Expect = 0.037
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +3
Query: 303 MAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMER---RKRVEALMSSK--LFR 467
+A T + G L EEEDERLK+ I+ RE + RKR EA M +K F
Sbjct: 473 VAATTEDQEAEKPGSLEEEEEDERLKEELEKIEERFREEMKEITRKREEATMETKNRFFE 532
Query: 468 EELERV 485
+++++V
Sbjct: 533 KKMQQV 538
>At2g16630.1 68415.m01909 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 359
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -3
Query: 705 PKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPPTIS 538
P Q P + P S PP + P P +P +S T L P +PV +LPP S
Sbjct: 167 PPQVPVKPHPKVPVIS--PDPPATLPPPKVPVISPDPPTTLPPPLVPVINLPPVTS 220
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 31.1 bits (67), Expect = 0.79
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -3
Query: 687 SPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVCSLPPTISLIL---CRSG 517
SP +P + ++SPP P + GR P+ PV +PP S+ L S
Sbjct: 118 SPPVLQPI-TPIASPPRFIPGDAPKEPPFSGRVTPAPVSSPVSDIPPIPSVALPPPTPSN 176
Query: 516 ASPPRASAGRGPVPILRGTA 457
P AS P PI + A
Sbjct: 177 VPPRNASNNHKPPPIEKSIA 196
>At2g36695.1 68415.m04502 expressed protein
Length = 117
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 401 RRCP--RNGTPEAR-RSSHVLEAVPRRIGTGPRPADARGGDAP 520
+RCP R G P + R V + PRR G P P+ R G AP
Sbjct: 69 KRCPPLREGVPPSPPRRKGVAPSPPRRKGVAPSPSPMRKGVAP 111
>At3g27350.1 68416.m03420 expressed protein
Length = 274
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +3
Query: 342 GPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLR 521
G EEE++++++ D V E E++ R + +FR LE+ + + + +L
Sbjct: 152 GDYVKEEEEKKVEEELLKEDWSVGEKEKQHRKSVTKNRPVFRLSLEKTIPPKSLDEISLT 211
Query: 522 SCRGSRRWSAGDCTP---EASGVLAAF-CRSTTSEVSKA*GMRRGEK 650
R R + + P + G+L+ F + T + +++ R+ EK
Sbjct: 212 EKRSERPMTQVEEKPVHRQRFGLLSCFISNAKTQDQNQSRNKRKTEK 258
>At2g40480.1 68415.m04996 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 541
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 357 EEEDERLKQRPADIDAD--VREMERRKRVEALMSSKLFREELERVLDQQ 497
E + +R+++ A+++ D V+E+E +EAL S+K E+L+R L Q+
Sbjct: 116 EFDIKRMEEHAAELEKDLIVKELETLDVLEALGSTKRIVEDLKRQLQQE 164
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 30.7 bits (66), Expect = 1.0
Identities = 28/81 (34%), Positives = 29/81 (35%)
Frame = +2
Query: 320 RDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLEAVPRRIGTGPRPAD 499
R RHR P H GRR A S RRR P +P ARR RR P
Sbjct: 286 RSPIRRHRRPTHE-GRRQSPAPS--RRRRSP---SPPARRRRSPSPPARRRRSPSPPARR 339
Query: 500 ARGGDAPLLQRIKEMVGGRLH 562
R P QR R H
Sbjct: 340 HRSPTPPARQRRSPSPPARRH 360
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 335 RHRTPVHRGGRRALEAASG--RHRRRCPRNG-TPEARRSSHVLEAVP 466
R TPV+R RR+ A+ R RRR P + +P RS VL P
Sbjct: 584 RSPTPVNRRSRRSSSASRSPDRRRRRSPSSSRSPSRSRSPPVLHRSP 630
>At4g32020.1 68417.m04558 expressed protein NuLL
Length = 181
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = -3
Query: 723 PGCCPNPKQ-----NRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLGPLRLPVC 559
P CPN ++ NRT R S SSPP + P+P PR ++ G L+ +
Sbjct: 25 PSACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVAPPLPP-PRAAVSAFVPKGTLKKSLS 83
Query: 558 SLPPTISLILCRSGASPPRASA 493
+ + + + G P+ ++
Sbjct: 84 NTVAVSQVRILKRGEEIPKETS 105
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/87 (33%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Frame = -3
Query: 729 SLPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQLG-PLRLPVCSL 553
S P P+P SPG P+ S V SPP + P P P S T G P P
Sbjct: 431 SPPITVPSPPTT-PSPGGSPPSPSIVPSPPSTTPSPGSPPTSPTTPTPGGSPPSSPTTPT 489
Query: 552 P---PTISLILCRSGASPPRASAGRGP 481
P P S G SPP + P
Sbjct: 490 PGGSPPSSPTTPTPGGSPPSSPTTPSP 516
>At3g52900.1 68416.m05830 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 164
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 333 NGTGPLSTEEEDERLKQRPADIDADVREMERRK-RVEALMSSKL-FREELERVLDQQMHE 506
NG P+ EE+E K A E+ER+K V+ + +L F EE R L Q + E
Sbjct: 18 NGKLPMEDNEEEEIWKVAVTRFQAREEEIERKKMTVKEKVQQRLGFAEEATRCLTQTLEE 77
>At2g32360.1 68415.m03955 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 175
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERV 485
EEED+ +K D D V E E K E +K +EE V
Sbjct: 124 EEEDQAMKDEEEDRDVKVEEDEEEKEKEKDGEAKYVKEEAREV 166
>At1g43760.1 68414.m05034 hypothetical protein
Length = 626
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 244 VLPDTNPGLA*QINRLELSEWLRRTQRRSRTAPDPCPPRRKTS 372
+LP+ P L I+ + +W R + RS+ PPR TS
Sbjct: 16 LLPEITPSLRQNISGYNIFDWKGRVRSRSKKRSSSTPPRLITS 58
>At4g11560.1 68417.m01853 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 587
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 303 MAETDSETIPNGTGPLSTEEEDERLKQRPAD 395
MAE D + T P + EEEDE +++P D
Sbjct: 70 MAEGDDDQAEEETNPEAEEEEDEEEEEKPDD 100
>At4g35590.1 68417.m05056 RWP-RK domain-containing protein low
similarity to minus dominance protein [Chlamydomonas
reinhardtii] GI:1928929; contains Pfam profile: PF02042
RWP-RK domain
Length = 370
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +3
Query: 261 PRSCLTNQ*TRAVGMAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVE 440
PR + Q + +ET+SE N S E D K ++ DA ++++KR
Sbjct: 179 PRKLVLKQDLNCLPDSETESEESVNEKTEHSEFEND---KTEQSESDAKTEILKKKKRTP 235
Query: 441 ALMSSKLFREELERVLDQQMHEGA 512
+ ++L EEL + D + E +
Sbjct: 236 SRHVAELSLEELSKYFDLTIVEAS 259
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -3
Query: 711 PNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMSLIGRTQ--LGPLRLPVCSLPPTIS 538
PNP + SP V PP+S P PS P S+ + L P+ P PP+ S
Sbjct: 200 PNPPEIVPSPPESGYTPGPVLGPPYSEPGPSTPTGSIPSPSSGFLPPIVYPPPMAPPSPS 259
Query: 537 L 535
+
Sbjct: 260 V 260
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 360 EEDERLKQ---RPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGATLRSCR 530
EE RLK R + D +V EMER ++ +A ++L RE +ER ++++ A R
Sbjct: 336 EEATRLKNLTIREEEAD-EVVEMERERQEDAENEAELVRECIERETEERLEAEARAEEVR 394
Query: 531 GSRR 542
++
Sbjct: 395 KEKQ 398
>At1g27580.1 68414.m03361 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins;simlar to unknown protein
GB:AAC63676
Length = 364
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 311 DGLRDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLEAVPRRIGT 481
DG +D E+HR P+ E + +R P N R+ VL +GT
Sbjct: 202 DGFKDVSEKHRLPMWMPSMTMKERERMKQKRSIPSNKGIAVTRAGQVLVVFTYDLGT 258
>At1g27540.1 68414.m03357 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins
Length = 413
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 311 DGLRDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLEAVPRRIGT 481
DG +D E+HR P+ E + +R P N R+ VL +GT
Sbjct: 251 DGFKDVSEKHRLPMWMPSMTMKERERMKQKRSIPSNKGIAVTRAGQVLVVFTYDLGT 307
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +1
Query: 202 AGPSAGPCMTPEGLVLPDTNPGLA*QINRLELSEWLRRTQRRSRTAPDPCPPRRKTSA*S 381
AG P TP LV P T+P + + + T+P P SA
Sbjct: 645 AGHLGSPSDTPSSLVSPSTSPPAGHLGSPSDTPSSVVTPSASPSTSPS-ASPSVSPSAFP 703
Query: 382 SVRPTSTPMSAKWNAGSASKLSCPRS 459
S P+++P ++ + SAS + P+S
Sbjct: 704 SASPSASPSASPSVSPSASPSASPQS 729
>At3g21350.1 68416.m02696 RNA polymerase transcriptional regulation
mediator-related contains weak similarity to RNA
polymerase transcriptional regulation mediator, subunit
6 homolog (Activator-recruited cofactor 33 kDa
component) (ARC33) (NY-REN-28 antigen)
(Swiss-Prot:O75586) [Homo sapiens]
Length = 257
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 297 VGMAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFRE 470
+ A TD+ + + TE ++E + +PA D++EM KRV+ +++S L+R+
Sbjct: 152 ISKAFTDAASKLETIRQVDTENQNEPAESKPASETVDLKEM---KRVDVILTS-LYRK 205
>At5g15890.1 68418.m01859 expressed protein
Length = 526
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 337 APDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLS 447
+P P PP R +SA S P + P+ A N S L+
Sbjct: 125 SPVPAPPHRNSSADQSPSPVNGPIPAPLNHTSLRHLN 161
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -3
Query: 645 PPFSYPMP-SIPRMSLIGRTQLGPLRLPVCSLPPTISLILCRSGASPPRASAGRGPVP 475
PP S P P S PR + + P VC P L+ S + PP + +G P P
Sbjct: 595 PPPSIPRPPSRPRYACCRIPAVNPPPRLVCGPYPLPRLVRVGSPSPPPPSMSGGAPPP 652
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 341 RTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLEAVPRRIGTGPRPADARG 508
R+P+ R RR++ + R RRR R+ P RRS P R + R A G
Sbjct: 621 RSPI-RLSRRSISRSPVRGRRRISRSPVPARRRSVRPRSPPPDRRRSLSRSASPNG 675
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 723 PGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSIPRMS 604
P P P + +P T P+ S+P S P PS P S
Sbjct: 275 PSGSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPS 314
>At2g40935.1 68415.m05053 expressed protein low similarity to
PGPS/D12 [Petunia x hybrida] GI:4105794; contains Pfam
profile PF04749: Protein of unknown function, DUF614
Length = 190
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +1
Query: 127 LSACYDRRSNLCVNFVCSDHLICRYA-----GPSAGPCMT 231
+ AC+D + CV C ++ + A G AGPC+T
Sbjct: 51 ICACFDDMQSCCVGLFCPCYIFGKNAELLGSGTFAGPCLT 90
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -3
Query: 564 VCSLPP----TISLILCRSGASPPRASAGRGPVPILRGTASRT*ELRRASGVPFRGHRRR 397
V SLPP ++SL L PP +S P+P GT+S T R G G R
Sbjct: 192 VLSLPPPPPQSLSLSLPSPPQPPPSSSFHAEPIPPTVGTSS-TKRRRTTPGETTAGGERE 250
Query: 396 CRPDAASSA 370
DA A
Sbjct: 251 VEEDAVGVA 259
>At5g22090.1 68418.m02572 expressed protein
Length = 463
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 327 SSLSPSQPFRQLESIDLSSKTWVS 256
S+ S + R+ S DLSSKTWVS
Sbjct: 31 SNTSSAPSLRRTFSADLSSKTWVS 54
>At1g69060.1 68414.m07902 expressed protein
Length = 630
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 357 EEEDERLKQRPADIDADVREMER-RKRVEALMSSKLFREELERV 485
+EE+ +QR I AD + +R R+++E + ++ R + ERV
Sbjct: 480 QEEEWESRQRQLQIQADEAQKQRKRRKLENMRKLEMERRQKERV 523
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 301 EWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRS 459
EW++R+ R + +PD + SS R T +P + N + S PRS
Sbjct: 570 EWVQRSSHRPKKSPDRSSDEPEWVETSSARSTKSPARSSDNLKWVQR-SSPRS 621
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 729 SLPGCCPNPKQNRTSPGTRRPACSGVSSPPFSYPMPSI 616
S P PNP +S + P SG SS P SY PS+
Sbjct: 166 SAPAPNPNPAPYSSSLYSAPPYSSGGSSIPPSYEKPSV 203
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,700,797
Number of Sequences: 28952
Number of extensions: 385958
Number of successful extensions: 1544
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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