Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0389
         (490 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   4.5  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   4.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 182 CLSRLNFMHKINQN**L*LSLSIFRTKTKNRDYWKTNVTNFGY 310
           C  ++ F+  I  N  +  +++IF++   + D W+T  TN  Y
Sbjct: 77  CTEKI-FLFAIYTNLSILTTVTIFKSAFWDVDKWRTLFTNLQY 118


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 301 IGYICFPVISIFSFSSKY 248
           +G I FP+ + FSF S++
Sbjct: 62  LGIIQFPISAHFSFMSRF 79


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 301 IGYICFPVISIFSFSSKY 248
           +G I FP+ + FSF S++
Sbjct: 18  LGIIQFPISAHFSFMSRF 35


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 38  PNSNWLYKKKKK 3
           P   WL+KKKK+
Sbjct: 322 PPFKWLFKKKKR 333


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 165 HKPNVWTQLRAYY 127
           +KP++W QL A Y
Sbjct: 91  NKPDMWKQLEAKY 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,602
Number of Sequences: 336
Number of extensions: 2102
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)