Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0388
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 3e-29
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 107 6e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 91 1e-18
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 84 1e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 66 3e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 2e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 35 0.069
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 34 0.091
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 34 0.091
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 34 0.091
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 34 0.12
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 32 0.49
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 32 0.49
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 32 0.49
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 32 0.49
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 32 0.49
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 32 0.49
SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.64
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.0
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 2.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.0
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 2.6
SB_35603| Best HMM Match : DUF1309 (HMM E-Value=0.51) 29 2.6
SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 2.6
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 29 4.5
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 4.5
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 28 6.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.0
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_29375| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 7.9
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 7.9
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 7.9
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THIMFETFNTPAMYVAIQAVLSLYA 509
T IMFETFN+PAMYVAIQAVLSLYA
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYA 145
Score = 127 bits (306), Expect = 9e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 110 bits (265), Expect = 9e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERG
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERG 198
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 435 THIMFETFNTPAMYVAIQAVLSLYA 509
T IMFETFN+PAMYVAIQAVLSLYA
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYA 144
Score = 124 bits (299), Expect = 7e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 111 bits (267), Expect = 5e-25
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 435 THIMFETFNTPAMYVAIQAVLSLYA 509
T IMFETFN+PAMYVAIQAVLSLYA
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYA 144
Score = 125 bits (302), Expect = 3e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 111 bits (267), Expect = 5e-25
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THIMFETFNTPAMYVAIQAVLSLYA 509
T IMFETFN+PAMYVAIQAVLSLYA
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYA 145
Score = 131 bits (317), Expect = 4e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 111 bits (267), Expect = 5e-25
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THIMFETFNTPAMYVAIQAVLSLYA 509
T IMFETFN+PAMYVAIQAVLSLYA
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYA 145
Score = 127 bits (306), Expect = 9e-30
Identities = 56/62 (90%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 2/28 (7%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYE--GYA 586
SGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 146 SGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 125 bits (302), Expect = 3e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 110 bits (265), Expect = 9e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERG
Sbjct: 108 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERG 160
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 347
SKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 420 NREKMTHIMFETFNTPAMYVAIQAVLSLYA 509
N + M IMFETFN+PAMYVAIQAVLSLYA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYA 107
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 107 bits (258), Expect = 6e-24
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
SGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERG
Sbjct: 24 SGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERG 76
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 441 IMFETFNTPAMYVAIQAVLSLYA 509
IMFE FN+PA+YVAIQAVLSLYA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYA 23
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 97.9 bits (233), Expect = 7e-21
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 437
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 438 HIMFETFNTPAMYVAIQAVLSLYA 509
+MFE + +Y+AIQAVL+LYA
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYA 148
Score = 78.2 bits (184), Expect = 6e-15
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +2
Query: 512 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RG
Sbjct: 150 GLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRG 201
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 94 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 252
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +3
Query: 327 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLY 506
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M +MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 507 A 509
A
Sbjct: 2189 A 2189
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
SGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERG
Sbjct: 2190 SGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERG 2242
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 201
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 83.8 bits (198), Expect = 1e-16
Identities = 34/53 (64%), Positives = 47/53 (88%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 667
+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G
Sbjct: 171 TGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEG 223
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +3
Query: 375 EHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYA 509
+HPVLLTEAPLNP+ NREK + FETFN PA+++++QAVLSLYA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYA 170
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNT 464
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T +MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 465 PAMYVAIQAVLSLYA 509
PA ++ +VL+ +A
Sbjct: 63 PAFFLCKNSVLTAFA 77
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +2
Query: 500 AVRSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGVLV 676
A +GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E V V
Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEETNVEV 133
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 201
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +2
Query: 521 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 664
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +1
Query: 70 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 240
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 241 GDEAQAK 261
GD A AK
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 279 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 392
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 521 TGIVLDSGDGVSHTVPI 571
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 198 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 82
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 34.7 bits (76), Expect = 0.069
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L CLC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 264 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 121
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +3
Query: 351 NELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVPPVS 530
N L++ PE + VL + LN AN + + A V A S +P VP
Sbjct: 157 NTLKITPENY-VLTNKQTLNLIANNALLVNTASPHTAHRAFIVTTCASTSTESPAVPVKP 215
Query: 531 CWTP--ATVSPTPCPSTK-DTHSPTP 599
TP A +PTP P T SP P
Sbjct: 216 ASTPTFAKNAPTPIPLTSVAPESPHP 241
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 428
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 445 CSKHSTRPPCTSPSKPCSRCTLRSYHRYRAG 537
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +3
Query: 381 PVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPT 560
PVL A P A + T + P ++ V + AP PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 561 PCPSTKDTHSPTP 599
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 168 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 341
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 342 TFYN 353
T N
Sbjct: 497 TCPN 500
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 401 SPQPQGQQREDDPHHVRNIQHARHVRRHPSR 493
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +3
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVP 521
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 522 PVSCWTPATVSPTPCPSTKDTHSP 593
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 354 ELRVAPE--EHP--VLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVP 521
E +APE E P + E+ P+ MT + ET TP VA + + + + P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 522 PVSCWTPATVSPTPCPSTKDTHSP 593
+ TV+P + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +3
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVP 521
T E VAPE + E+ L + +T + ET TP VA + + + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 522 PVSCWTPATVSPTPCPSTKDTHSP 593
+ TV+P + + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Frame = +3
Query: 354 ELRVAPEEHPVL-LTEAP---LNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVP 521
E APE V T AP + P+ +T + ET PA A++ +L +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 522 PVSCWTPATVSP--TPCPSTKDTHSPT--PSCVW 611
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNE 356
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 88 EVAALVVDNGSGMCKAGFAGDDAPRAV 168
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 360 RVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWT 539
++A + +P + E N K + +K+ M +T + + ++ +A +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 540 PATVSPTPCPSTKDTHSP-TPSCV 608
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +3
Query: 354 ELRVAPEE----HPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVP 521
E VAPE L E P+ + +T P VAI++ L+L + V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 522 PVSCWTPATVSPTPCPSTKDTHSP 593
+ T TV+P + + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_35603| Best HMM Match : DUF1309 (HMM E-Value=0.51)
Length = 78
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 558 WETPSPESSTIPVVRPERTARA-RLGWRRTWRA 463
WET +P + P +PE+ + R+ W++ W A
Sbjct: 32 WETQAPAYTMRPKTQPEKDSGGDRVAWKKQWMA 64
>SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 558 WETPSPESSTIPVVRPERTARA-RLGWRRTWRA 463
WET +P + P +PE+ + R+ W++ W A
Sbjct: 58 WETQAPAYTMRPKTQPEKDSGGDRVAWKKQWMA 90
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +3
Query: 333 WHHTFYNELRVAPEEH----PVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLS 500
+ H Y + P H P T P P+ + ++ ++ + P+ ++ +
Sbjct: 170 YKHPSYPTYNIPPTPHTSIPPTPHTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQASLLPH 229
Query: 501 LYAPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 599
+ A ++P + ++ PTP P T +PTP
Sbjct: 230 IQASLLPLIP---NTSIPPTPTPHTSIPPTPTP 259
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 504 YAPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 602
++P+ PP C + V PT P S+K + SP+PS
Sbjct: 330 FSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = +3
Query: 399 APLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPSTK 578
A P A + + +NTP ++ + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQA--PPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 579 DTHSP 593
P
Sbjct: 946 QPQPP 950
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 459 NTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPST---KDTHSP 593
N P M A++ L Y P PP P V+P P P T DT +P
Sbjct: 106 NYPLMN-AVKKYLGGYVPPPPPTGTLPPPPVTPPPGPETPPPPDTPAP 152
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 450 ETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPSTKD 581
+ + P + +Q +++ P + P +C TP +SP T+D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +1
Query: 487 KPCSRCTLRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHE 648
K R + R R R G R+ P + TPP+ PA+ RL HE
Sbjct: 934 KKSIRDSFRRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 556 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 657
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 498 SLYAPVVPPVSCWTPATVSPTPCPS-TKDTHSP-TPSCVWT*PVA 626
SL +P + PV+ TP+T + P + +K+T SP P V P A
Sbjct: 192 SLTSPAIQPVAPATPSTTTTAPSTADSKETTSPLVPEAVGASPEA 236
>SB_29375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +3
Query: 465 PAMYVAIQAVLSLYAPVVPPVSCWTP---ATVSPTPCPSTKDTHSPTPS 602
P Y +Q+ L Y PV +TP A V TP S H+P S
Sbjct: 144 PVKYTPVQSALVKYTPVESAPVKYTPVESAPVKHTPVESAPVKHTPVQS 192
>SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 328 FSMSSQLVTIPCSMGYLRVRIPLLLVPHLLHKSPSVP 218
F +S LVT S + + P LLVPH L K S+P
Sbjct: 571 FEISPPLVT---SSSHSLTQSPTLLVPHRLKKKESIP 604
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/74 (27%), Positives = 26/74 (35%)
Frame = +3
Query: 381 PVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPT 560
P T P P T +T TP + P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTST-APTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 561 PCPSTKDTHSPTPS 602
TK T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = -2
Query: 264 LFCLCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 100
+F CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 99 RGNFFVAHLE 70
G V L+
Sbjct: 520 HGQVDVLLLD 529
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 513 VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 608
VVPP+ P V P+P + + SPTPSC+
Sbjct: 210 VVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 393 TEAP---LNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPTP 563
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 564 CPSTKDTHSP 593
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +2
Query: 365 RPRGTPSPAH*GSPQPQGQQREDDPHHVRNIQHARHVRRHPSRALAVR------SGRTTG 526
R R P PA+ ++R P I H R VR+ RA AV SG G
Sbjct: 82 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGVAAG 141
Query: 527 IVLDSGDGVS 556
++ +G GVS
Sbjct: 142 VLSSAGLGVS 151
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,754,253
Number of Sequences: 59808
Number of extensions: 636355
Number of successful extensions: 4463
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 3971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4428
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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