Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0385
         (708 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B45BA Cluster: PREDICTED: similar to ENSANGP000...    58   2e-07
UniRef50_Q9W3D8 Cluster: CG12111-PA; n=3; Sophophora|Rep: CG1211...    46   0.001
UniRef50_Q59DY6 Cluster: CG33532-PA; n=13; Sophophora|Rep: CG335...    40   0.060
UniRef50_Q7QJC0 Cluster: ENSANGP00000017928; n=1; Anopheles gamb...    35   1.7  
UniRef50_Q8IRH8 Cluster: CG9134-PB, isoform B; n=5; Endopterygot...    35   2.3  
UniRef50_Q29EV3 Cluster: GA21567-PA; n=2; Endopterygota|Rep: GA2...    35   2.3  
UniRef50_Q9HUB8 Cluster: Probable ubiquinone biosynthesis protei...    33   5.2  
UniRef50_Q9NL63 Cluster: Haustellum specific protein A; n=1; Sar...    33   6.9  
UniRef50_Q7QJC3 Cluster: ENSANGP00000018329; n=3; Anopheles gamb...    33   9.1  
UniRef50_Q23G95 Cluster: Helicase conserved C-terminal domain co...    33   9.1  

>UniRef50_UPI00015B45BA Cluster: PREDICTED: similar to
           ENSANGP00000027469, partial; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to
           ENSANGP00000027469, partial - Nasonia vitripennis
          Length = 758

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = +1

Query: 514 GTEHVMTNGCIALKAPTFHWEPQHCGEIKDFICEQTRCYYYNYGSIPVSFRARGNA 681
           G E++  N C+A+ +P   W    C  +K+FICEQ+R Y+YNYGSI V    RG A
Sbjct: 630 GIENI--NSCMAMSSPNLMWSTVDCMLLKNFICEQSRSYHYNYGSISVPASLRGVA 683


>UniRef50_Q9W3D8 Cluster: CG12111-PA; n=3; Sophophora|Rep:
           CG12111-PA - Drosophila melanogaster (Fruit fly)
          Length = 188

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
 Frame = +2

Query: 209 FPVLSVLQIIRSSTGTFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTD-MFLWMSTG 382
           F      +++ +   + E K + +++  Y+   G+   D FW SGN+LGT+  F WMS G
Sbjct: 67  FQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGTEGAFYWMSNG 126

Query: 383 LPFN-ATFNYMRRLP 424
            P   A +N  +++P
Sbjct: 127 RPMTYAPWNGPKQMP 141


>UniRef50_Q59DY6 Cluster: CG33532-PA; n=13; Sophophora|Rep:
           CG33532-PA - Drosophila melanogaster (Fruit fly)
          Length = 186

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = +2

Query: 236 IRSSTGTFETKEKADSITTYLTNAGYNKYDFWTSGNNLG-TDMFLWMS 376
           ++S   TFET E+ D+I  +L NA  ++ + WTSGN+LG T    W S
Sbjct: 70  LQSELVTFETAEEFDAIAAFL-NARGDRSEHWTSGNDLGKTGTHYWFS 116


>UniRef50_Q7QJC0 Cluster: ENSANGP00000017928; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000017928 - Anopheles gambiae
           str. PEST
          Length = 173

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +2

Query: 254 TFETKEKADSITTYLTNAGY-----NKYDFWTSGNNLG-TDMFLWMSTG 382
           +  ++ + D +  Y+  +G+     +    WTSGN+LG  + FLW STG
Sbjct: 65  SINSQSQLDEVIEYINKSGFFNANESNLQLWTSGNDLGEKNQFLWTSTG 113


>UniRef50_Q8IRH8 Cluster: CG9134-PB, isoform B; n=5;
           Endopterygota|Rep: CG9134-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 376

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 254 TFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTD-MFLWMSTGLPFNAT 400
           +  ++E+ D +  ++ + G     FW SG +L  +  F WM+TG P   T
Sbjct: 276 SISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFT 325


>UniRef50_Q29EV3 Cluster: GA21567-PA; n=2; Endopterygota|Rep:
           GA21567-PA - Drosophila pseudoobscura (Fruit fly)
          Length = 309

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 254 TFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTD-MFLWMSTGLPFNAT 400
           +  ++E+ D +  ++ + G     FW SG +L  +  F WM+TG P   T
Sbjct: 209 SISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFT 258


>UniRef50_Q9HUB8 Cluster: Probable ubiquinone biosynthesis protein
           ubiB; n=38; Proteobacteria|Rep: Probable ubiquinone
           biosynthesis protein ubiB - Pseudomonas aeruginosa
          Length = 533

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 495 HNAPPT-WDGTRHD*WLHRAQSSDLPLGASTLRRDQGL 605
           HNAPP  W G+RHD WL R   + L +GA+ +   Q L
Sbjct: 478 HNAPPPEWKGSRHD-WLGRLVGAVLLVGAAEVGLGQQL 514


>UniRef50_Q9NL63 Cluster: Haustellum specific protein A; n=1;
           Sarcophaga peregrina|Rep: Haustellum specific protein A
           - Sarcophaga peregrina (Flesh fly) (Boettcherisca
           peregrina)
          Length = 168

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +2

Query: 245 STGTFETKEKADSITTYLTNAGYNKYDFWTSGNNLG-TDMFLWMSTGLPFNAT 400
           S  + E++ +  S+  YL +       FW SG NL     + W STG P   T
Sbjct: 58  SLASIESETENKSLKDYLYSQSILANQFWLSGTNLADKSTYSWQSTGKPMTFT 110


>UniRef50_Q7QJC3 Cluster: ENSANGP00000018329; n=3; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000018329 - Anopheles gambiae
           str. PEST
          Length = 171

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +2

Query: 254 TFETKEKADSITTYLTNAGYNK-YDF---WTSGNNLGTD-MFLWMSTG 382
           T    E+ + +  Y+  +GY K +D    WTSGN+LG +  F   STG
Sbjct: 65  TINNDEQLNGVIEYIEKSGYTKTHDILHMWTSGNDLGEEGQFFCSSTG 112


>UniRef50_Q23G95 Cluster: Helicase conserved C-terminal domain
            containing protein; n=1; Tetrahymena thermophila
            SB210|Rep: Helicase conserved C-terminal domain
            containing protein - Tetrahymena thermophila SB210
          Length = 3523

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +2

Query: 194  PRAQLFPVLSVLQIIRSSTGTFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTDMFL 367
            PR       + L+ I+S   + E   K D I T ++N   +  DF+ S NN+   ++L
Sbjct: 2946 PRLDSINAKNKLREIKSQNVSLEITGKKDEILTAISNLNVHTVDFFNSENNITESVYL 3003


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,583,066
Number of Sequences: 1657284
Number of extensions: 14829574
Number of successful extensions: 37268
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37255
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)