Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0385
         (708 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0187 + 21433842-21433887,21434504-21435246,21435437-214354...    29   3.6  
06_03_0267 + 18970578-18972464                                         28   6.3  
06_03_0143 + 17215975-17216745                                         28   6.3  

>09_06_0187 +
           21433842-21433887,21434504-21435246,21435437-21435484,
           21435929-21436814,21436967-21437056,21437543-21438417
          Length = 895

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 168 FISRMNPYSPELNYFLSYQY 227
           FI R+  +SP++ YF SY+Y
Sbjct: 190 FIGRLPEWSPDVRYFTSYEY 209


>06_03_0267 + 18970578-18972464
          Length = 628

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 509 RRCVVEQCFLVVRLEGPCCHQHAGQEHRWAVSACS*KSH*MADRCSS 369
           +RCVV  C    R    CC +H G + R   + CS  +    D C +
Sbjct: 447 KRCVVPGCTKSARGRTDCCVRHGGGK-RCQFTGCSKSAQGSTDFCKA 492


>06_03_0143 + 17215975-17216745
          Length = 256

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 503 CVVEQCFLVVRLEGPCCHQHAGQEHRWAVSACS 405
           C V  C+  VRL  P C   AG+  R    ACS
Sbjct: 202 CDVPFCYCRVRLRRPACAAPAGRAARRLEKACS 234


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,825,789
Number of Sequences: 37544
Number of extensions: 433194
Number of successful extensions: 1004
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)