Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0385
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical pr... 31 0.81
AF025470-3|AAB71057.1| 394|Caenorhabditis elegans Hypothetical ... 31 1.1
AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin... 31 1.1
AL023851-1|CAA19554.1| 149|Caenorhabditis elegans Hypothetical ... 30 1.4
AF040651-4|AAB95014.1| 234|Caenorhabditis elegans Hypothetical ... 29 2.5
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 29 3.3
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 29 3.3
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 29 3.3
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 29 3.3
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024202-8|AAK93869.2| 816|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81076-9|CAB03057.1| 372|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 28 7.5
AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical ... 28 7.5
AF125952-2|AAD14700.1| 478|Caenorhabditis elegans Hypothetical ... 28 7.5
AC006722-8|AAK68418.2| 478|Caenorhabditis elegans Hypothetical ... 28 7.5
Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81542-8|CAB04417.2| 402|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 299 TNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFN 406
T N ++ WT G+ GTD F+W TG P N +N
Sbjct: 110 TCTALNSFE-WTDGSTTGTDGFIW-KTGDPNNYLYN 143
>Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical
protein D1054.7 protein.
Length = 113
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 329 WTSGNNLGTDMFLWMSTGLPFNAT 400
WT G+ GTD F+W TG P NA+
Sbjct: 57 WTDGSTTGTDGFIW-ETGEPNNAS 79
>AF025470-3|AAB71057.1| 394|Caenorhabditis elegans Hypothetical
protein W10D9.3 protein.
Length = 394
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 194 PRAQLFPVLSVLQIIRSSTGTFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTDMFLWM 373
P AQ L+ +I+ S G F++ + D + ++N+ Y FWT G + T +
Sbjct: 48 PLAQSHEDLACGIVIKPSNGHFKSYKLGDDLHIGISNSQGLIYSFWTKGIEIDTSKWENS 107
Query: 374 STGLPFNATF 403
L F A F
Sbjct: 108 LKILDFRAFF 117
>AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin
protein 3 protein.
Length = 409
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +1
Query: 514 GTEHVMTNGCIALKAPTFHWEPQHCGEIKDFICEQTRCY----YYNYGSIPVSF 663
G V T C+ + + W C E + ++CE + YYNY + +F
Sbjct: 110 GNPKVTTGSCVYFETSSGRWLSAPCTEPRSYVCETPSTHEDPCYYNYNNYCYTF 163
>AL023851-1|CAA19554.1| 149|Caenorhabditis elegans Hypothetical
protein Y68A4B.1 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 221 SVLQIIRSSTGTF--ETKEKADSITTYLTNA--GYNKYDFWTSGNNLGTDMFLWMSTGLP 388
S + + S TG+F K A + + LT N + WT G+ GTD FLW + G P
Sbjct: 48 SYVSLYGSETGSFWVGAKRTAACLESQLTLTCNALNSLE-WTDGSTTGTDGFLWRN-GDP 105
Query: 389 FNATFNY 409
N Y
Sbjct: 106 NNGGIYY 112
>AF040651-4|AAB95014.1| 234|Caenorhabditis elegans Hypothetical
protein W04H10.4 protein.
Length = 234
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 299 TNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFN 406
T N ++ WT G+ GTD F+W G P N +N
Sbjct: 168 TCTALNSFE-WTDGSTTGTDGFIW-KAGDPNNYQYN 201
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 620 VCSHMKSLISPQC*GSQWKVGALSAMQPLVMTCSVPCRRCVVEQCFLVVRLEGPCC 453
VCS+ S+ + G QW+ G S + +V CR+ V C V +EG CC
Sbjct: 737 VCSYQSSVYAI---GEQWQDGRCSNCSCVTGGQTV-CRQMVCPHCDDPVPIEGHCC 788
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 620 VCSHMKSLISPQC*GSQWKVGALSAMQPLVMTCSVPCRRCVVEQCFLVVRLEGPCC 453
VCS+ S+ + G QW+ G S + +V CR+ V C V +EG CC
Sbjct: 671 VCSYQSSVYAI---GEQWQDGRCSNCSCVTGGQTV-CRQMVCPHCDDPVPIEGHCC 722
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 620 VCSHMKSLISPQC*GSQWKVGALSAMQPLVMTCSVPCRRCVVEQCFLVVRLEGPCC 453
VCS+ S+ + G QW+ G S + +V CR+ V C V +EG CC
Sbjct: 737 VCSYQSSVYAI---GEQWQDGRCSNCSCVTGGQTV-CRQMVCPHCDDPVPIEGHCC 788
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 620 VCSHMKSLISPQC*GSQWKVGALSAMQPLVMTCSVPCRRCVVEQCFLVVRLEGPCC 453
VCS+ S+ + G QW+ G S + +V CR+ V C V +EG CC
Sbjct: 671 VCSYQSSVYAI---GEQWQDGRCSNCSCVTGGQTV-CRQMVCPHCDDPVPIEGHCC 722
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 620 VCSHMKSLISPQC*GSQWKVGALSAMQPLVMTCSVPCRRCVVEQCFLVVRLEGPCC 453
VCS+ S+ + G QW+ G S + +V CR+ V C V +EG CC
Sbjct: 671 VCSYQSSVYAI---GEQWQDGRCSNCSCVTGGQTV-CRQMVCPHCDDPVPIEGHCC 722
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 620 VCSHMKSLISPQC*GSQWKVGALSAMQPLVMTCSVPCRRCVVEQCFLVVRLEGPCC 453
VCS+ S+ + G QW+ G S + +V CR+ V C V +EG CC
Sbjct: 671 VCSYQSSVYAI---GEQWQDGRCSNCSCVTGGQTV-CRQMVCPHCDDPVPIEGHCC 722
>AC024202-8|AAK93869.2| 816|Caenorhabditis elegans Hypothetical
protein Y71H2B.5 protein.
Length = 816
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 566 KVGALSAMQPLVMTCSVPCRRCVVEQCFLVVRLEGPCCHQHAGQEHR 426
K GAL ++PLVM R ++ VV P C A + HR
Sbjct: 720 KDGALRVIRPLVMVREKALRNFAEDKKLPVVAENCPACFNQATERHR 766
>Z81076-9|CAB03057.1| 372|Caenorhabditis elegans Hypothetical
protein F35C5.8 protein.
Length = 372
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +1
Query: 535 NGCIA---LKAPTFHWEPQHCGEIKDFICEQTRCYYYNY 642
N C+A T W P C FICEQ C NY
Sbjct: 330 NACVADMKYSDGTTAWTPVSCANNFRFICEQVACDTDNY 368
>Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical
protein C31G12.2 protein.
Length = 195
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 329 WTSGNNLGTDMFLWMSTGLPFNA 397
WT G+ GTD ++W S G P NA
Sbjct: 138 WTDGSTTGTDGWIWRS-GEPNNA 159
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 498 NAPPTWDGTRH 530
NAPPTW G+RH
Sbjct: 99 NAPPTWPGSRH 109
>AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical
protein Y102A5C.16 protein.
Length = 200
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 329 WTSGNNLGTDMFLWMSTGLPFNATFN 406
WT G+ G+D F+W P N + N
Sbjct: 143 WTDGSATGSDAFIWNVATEPNNGSLN 168
>AF125952-2|AAD14700.1| 478|Caenorhabditis elegans Hypothetical
protein C01B4.8 protein.
Length = 478
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 544 IALKAPTFHWEPQHCGEIKDFICEQT---RCYYYNYGSIPVSF 663
+A+ + F W C I F+CE + R YY +G + + F
Sbjct: 177 LAVLSCAFQWSNVICMPISGFLCESSWGWRSIYYLFGIVTIVF 219
>AC006722-8|AAK68418.2| 478|Caenorhabditis elegans Hypothetical
protein Y19D10A.5 protein.
Length = 478
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 544 IALKAPTFHWEPQHCGEIKDFICEQT---RCYYYNYGSIPVSF 663
+A+ + F W C I F+CE + R YY +G + + F
Sbjct: 177 LAVLSCAFQWSNVICMPISGFLCESSWGWRSIYYLFGIVTIVF 219
>Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical
protein F49A5.5b protein.
Length = 400
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 8/53 (15%)
Frame = +1
Query: 514 GTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICEQTRCYY-----YNYGS 648
G + M GCI K W C EI F+CE Y YNY +
Sbjct: 236 GYPNNMAGGCIYYKTTGTQAGQWSSGSCNEIMSFVCELPATIYDSTCKYNYNN 288
>Z81542-8|CAB04417.2| 402|Caenorhabditis elegans Hypothetical
protein F49A5.5a protein.
Length = 402
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 8/53 (15%)
Frame = +1
Query: 514 GTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICEQTRCYY-----YNYGS 648
G + M GCI K W C EI F+CE Y YNY +
Sbjct: 238 GYPNNMAGGCIYYKTTGTQAGQWSSGSCNEIMSFVCELPATIYDSTCKYNYNN 290
>AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical
protein Y68A4B.2 protein.
Length = 209
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 329 WTSGNNLGTDMFLW-MSTGLPFNATFN 406
WT G+ GTD F W +S G P N N
Sbjct: 132 WTDGSATGTDGFNWRLSDGEPNNLFLN 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,391,655
Number of Sequences: 27780
Number of extensions: 357507
Number of successful extensions: 895
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -