Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0384
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 117 5e-27
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 117 6e-27
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 117 6e-27
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 116 8e-27
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 116 8e-27
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 113 6e-26
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 112 2e-25
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 111 2e-25
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 101 3e-22
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 60 1e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 50 1e-06
12_02_1282 + 27528159-27529148,27529549-27529614 50 1e-06
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 47 1e-05
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 45 3e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 44 9e-05
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 37 0.008
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 31 0.40
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 29 1.6
08_02_0309 - 15622877-15623710 29 2.1
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 28 5.0
08_01_0927 - 9123473-9123589,9124534-9124616,9125177-9125252,912... 28 5.0
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 27 6.5
07_03_0463 - 18449908-18450171,18450718-18450810,18451170-184512... 27 8.7
04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199... 27 8.7
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 117 bits (282), Expect = 5e-27
Identities = 55/69 (79%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 306 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 365
Query: 296 PSIVHRKCF 270
PSIVHRKCF
Sbjct: 366 PSIVHRKCF 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 117 bits (281), Expect = 6e-27
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESG 368
Query: 296 PSIVHRKCF 270
P+IVHRKCF
Sbjct: 369 PAIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 117 bits (281), Expect = 6e-27
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESG 368
Query: 296 PSIVHRKCF 270
P+IVHRKCF
Sbjct: 369 PAIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 116 bits (280), Expect = 8e-27
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 312 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESG 371
Query: 296 PSIVHRKCF 270
P+IVHRKCF
Sbjct: 372 PAIVHRKCF 380
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 116 bits (280), Expect = 8e-27
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
Query: 296 PSIVHRKCF 270
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 113 bits (273), Expect = 6e-26
Identities = 52/69 (75%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWIS+ EY+ESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESG 368
Query: 296 PSIVHRKCF 270
P+IVHRKCF
Sbjct: 369 PAIVHRKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 112 bits (269), Expect = 2e-25
Identities = 52/69 (75%), Positives = 59/69 (85%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ +LAPS+MK+K+IAPP+RKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 308 PGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 367
Query: 296 PSIVHRKCF 270
P IVH KCF
Sbjct: 368 PGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 111 bits (268), Expect = 2e-25
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = -3
Query: 440 ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 270
ALAP +MKIK++APP+RKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 320 ALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 101 bits (242), Expect = 3e-22
Identities = 54/83 (65%), Positives = 61/83 (73%), Gaps = 17/83 (20%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQ------------- 336
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQ
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVAR 368
Query: 335 -QMWISKQEYDESGPSIVHRKCF 270
QMWISK EYDESGP+IVHRKCF
Sbjct: 369 MQMWISKGEYDESGPAIVHRKCF 391
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -3
Query: 446 SQALAPSTMKIKIIAPPK-RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 270
+ A+ PS +K P +YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 339 ASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/39 (56%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = -3
Query: 419 KIKIIAPP---KRKYSVWIGGSILASLSTFQQMWISKQE 312
++K++A +R++SVWIGGSILASL +FQQMW SK +
Sbjct: 431 RVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -3
Query: 359 LASLSTFQQMWISKQEYDESGPSIVHRKCF 270
LA S +MWI+K EYDESGPSIVHRKCF
Sbjct: 322 LAPSSMKIKMWIAKAEYDESGPSIVHRKCF 351
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -3
Query: 422 MKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 288
+++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 418 IEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = -3
Query: 455 KRKSQALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 276
+++ + L P ++KIIA W GGS+LA F+ M I+K EY+E G R+
Sbjct: 367 EKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRR 426
Query: 275 CF 270
F
Sbjct: 427 FF 428
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 43.6 bits (98), Expect = 9e-05
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -3
Query: 422 MKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 288
+++ ++A P + Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 385 VEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = -3
Query: 506 VLSGWYPHVPLESPPVCKRKSQAL-APSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQM 330
VLSG +P S + K + L A + I++I PP S W G +++++STF +
Sbjct: 402 VLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEA 461
Query: 329 W-ISKQEYDE----SGPSIVH 282
W I K+++ + +GPS V+
Sbjct: 462 WCIKKKQFRQKTRRNGPSFVN 482
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 31.5 bits (68), Expect = 0.40
Identities = 10/25 (40%), Positives = 21/25 (84%)
Frame = -3
Query: 422 MKIKIIAPPKRKYSVWIGGSILASL 348
++++I PP+RK+ V++GG++LA +
Sbjct: 366 LRLRIEDPPRRKHMVYLGGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -3
Query: 431 PSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 276
P +K++ W G + A+ S F + S +Y E G ++ HRK
Sbjct: 651 PYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHRK 702
>08_02_0309 - 15622877-15623710
Length = 277
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 437 EPVISFCIPAAIPGVHGGTTRTIP 508
+P+ ++C+ + HGGT RT+P
Sbjct: 169 DPLHAYCVATTLVAQHGGTWRTLP 192
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 333 LLEGREGGEDRSTDPYRVLPLWRSNDLNLHCRWGESL 443
+L+ E S P +LPL NDL+ RWG L
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWGGGL 438
>08_01_0927 -
9123473-9123589,9124534-9124616,9125177-9125252,
9125641-9125740,9125996-9126064,9126122-9126207,
9126293-9126430,9126688-9126810,9128130-9129719,
9129929-9130402
Length = 951
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 375 PYRVLPLWRSNDLNLHCRWGESL*FPFAYR 464
P V+PL NDL+ WG S FPF ++
Sbjct: 757 PVAVIPLGTGNDLSRSFGWGAS--FPFGWK 784
>01_07_0383 -
43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 474 GIAAGMQKEITGSRPIDNED*DHCSSKEEVLGMDRWIDPRLPLYLPTDVDLE 319
G+AA + G+ PI H +S+ E DP + LP DVD E
Sbjct: 12 GLAASLLPHAQGAVPIVGFGGYHGASRVEPAAPSSSTDPDASILLPPDVDSE 63
>07_03_0463 -
18449908-18450171,18450718-18450810,18451170-18451254,
18451607-18451705,18452099-18452238,18453036-18453482
Length = 375
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 169 ITIISYVQLN*RRLQA*IEQPAAGCWR 249
+T + +V L RLQ +E PAA CWR
Sbjct: 245 LTFVPFVVL---RLQKFLESPAATCWR 268
>04_03_0819 +
20018496-20019487,20019587-20019721,20019834-20019978,
20020135-20020416,20020649-20020910,20021028-20021224,
20021315-20021425,20022341-20022392,20022442-20022584,
20023121-20023210,20023300-20023800,20024108-20024176,
20024866-20025011,20025475-20025530,20026140-20026286,
20027405-20027530,20027608-20027876,20028026-20028127
Length = 1274
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 381 RVLPLWRSNDLNLHCRWGESL*FPFAYR 464
R L LWR ++ H +W E+L F YR
Sbjct: 699 RSLGLWRLEEVLSHFKWPETLETDFFYR 726
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,357,052
Number of Sequences: 37544
Number of extensions: 260204
Number of successful extensions: 704
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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