Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0384
(508 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 118 2e-27
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 116 7e-27
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 116 7e-27
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 116 7e-27
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 116 9e-27
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 116 9e-27
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 114 3e-26
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 114 3e-26
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 102 2e-22
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 101 3e-22
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 93 7e-20
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 73 8e-14
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 72 2e-13
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 59 1e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 43 1e-04
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 1e-04
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 42 3e-04
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 30 0.78
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 30 1.0
At5g57690.1 68418.m07211 diacylglycerol kinase, putative contain... 29 2.4
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.4
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 28 3.1
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 5.5
At2g39440.1 68415.m04841 expressed protein 27 7.3
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 118 bits (284), Expect = 2e-27
Identities = 55/69 (79%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESG 368
Query: 296 PSIVHRKCF 270
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 116 bits (280), Expect = 7e-27
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
Query: 296 PSIVHRKCF 270
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 116 bits (280), Expect = 7e-27
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
Query: 296 PSIVHRKCF 270
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 116 bits (280), Expect = 7e-27
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 3/69 (4%)
Frame = -3
Query: 467 PPVCKRKSQ---ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESG 297
P + R S+ ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
Query: 296 PSIVHRKCF 270
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 116 bits (279), Expect = 9e-27
Identities = 51/57 (89%), Positives = 56/57 (98%)
Frame = -3
Query: 440 ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 270
ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 116 bits (279), Expect = 9e-27
Identities = 51/57 (89%), Positives = 56/57 (98%)
Frame = -3
Query: 440 ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 270
ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 114 bits (275), Expect = 3e-26
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = -3
Query: 440 ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 270
ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 114 bits (275), Expect = 3e-26
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = -3
Query: 440 ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 270
ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 102 bits (244), Expect = 2e-22
Identities = 43/61 (70%), Positives = 55/61 (90%)
Frame = -3
Query: 452 RKSQALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 273
++ ALA + M+IKI+APP+RKYSVWIGGSILASLST++QMWI+K EY+E+GP+IVH KC
Sbjct: 269 KEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKC 328
Query: 272 F 270
F
Sbjct: 329 F 329
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 101 bits (242), Expect = 3e-22
Identities = 43/61 (70%), Positives = 53/61 (86%)
Frame = -3
Query: 452 RKSQALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 273
++ ALAP +MKIK++APP+RKYSVW+GGSILASLS+F MWI+K EYDE G +IVHRKC
Sbjct: 318 KEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKC 377
Query: 272 F 270
F
Sbjct: 378 F 378
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 93.5 bits (222), Expect = 7e-20
Identities = 39/60 (65%), Positives = 50/60 (83%)
Frame = -3
Query: 452 RKSQALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 273
++ AL PS+MK+K++ PP+ + SVWIGGSILASLSTF QMWI+K EY+E G +IVHRKC
Sbjct: 306 KELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = -3
Query: 440 ALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISK 318
ALAPS+MKIK++APP+RKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 72.1 bits (169), Expect = 2e-13
Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Frame = -3
Query: 434 APSTMKIKIIAP---PKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 273
+P + ++K++A +R++SVWIGGSILASL +FQQMW SK EY+E G S + RKC
Sbjct: 384 SPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -3
Query: 446 SQALAPSTMKIKIIAPPKR-KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 270
S A+ P+ +K P YS W+GG+ILA + Q ++K +YDE+GPS+VHRKCF
Sbjct: 304 SSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -3
Query: 437 LAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 270
L P +KI VW GGS+LAS F+ M ++K EY+E G + R+ F
Sbjct: 365 LVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = -3
Query: 452 RKSQALAPSTMKIKIIAPPKRKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 288
R + +++ +++ P ++++VW GGS+L+S F +K+EY+E G SI
Sbjct: 362 RTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 41.5 bits (93), Expect = 3e-04
Identities = 15/49 (30%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 422 MKIKIIAPPKRKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 279
++++I PP+RK+ V++GG++LA + + WI++++Y E G + +++
Sbjct: 337 LRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 30.3 bits (65), Expect = 0.78
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 375 PYRVLPLWRSNDLNLHCRWGESL*FPFAYR 464
P V+PL NDL+ WG S FPFA+R
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGS--FPFAWR 219
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 375 PYRVLPLWRSNDLNLHCRWGESL*FPFAYR 464
P V+PL NDL+ WG S FPFA+R
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGS--FPFAWR 216
>At5g57690.1 68418.m07211 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 498
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 375 PYRVLPLWRSNDLNLHCRWGESL*FPFAYR 464
P ++PL NDL+ WG S FPFA++
Sbjct: 188 PVSIMPLGTGNDLSRSFGWGGS--FPFAWK 215
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = -3
Query: 455 KRKSQALAPSTMK--IKIIAPPKRKYSVWIGGSILASLSTFQQMW-ISKQEY 309
+R+ Q PS++ I++I PP + W G ++++LS F W I+++++
Sbjct: 412 ERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -2
Query: 411 DHCSSKEEVLGMDRWIDPRLPLYLPTDVDLETGVRRV 301
D C ++ +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 488 PHVPLESPPVCKRKSQALAPSTMKIKIIAP 399
P+ P ++ P+ KR+ Q +PST + K +P
Sbjct: 610 PNDPYDASPIKKRRPQPPSPSTEETKTTSP 639
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 321 RDP-HLLEGREGGEDRSTDPYRVLPLWRSNDL 413
R+P G E GEDR DP + + R NDL
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDL 70
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,164,092
Number of Sequences: 28952
Number of extensions: 188762
Number of successful extensions: 520
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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