Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0381
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.1  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 330 FLQARSFIRLIRYFLKTCNRHDRVPEY 250
           F  ++  IR + +F K CN    VP Y
Sbjct: 4   FNYSKKDIRSLSFFYKICNIFGIVPPY 30


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 330 FLQARSFIRLIRYFLKTCNRHDRVPEY 250
           F  ++  IR + +F K CN    VP Y
Sbjct: 4   FNYSKKDIRSLSFFYKICNIFGIVPPY 30


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 193 HYYHALNSLHLPFLMILFY 137
           +YY+A   +HL + +++ Y
Sbjct: 115 YYYYAFFGVHLAYGVVIIY 133


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 265 SSAGIRSPLPRNGCICLSSGCQSTHYYHALNSLHLP 158
           SS+G+ SP         SSG  ++   +A   LH+P
Sbjct: 23  SSSGMTSPAAAPPPATTSSGSPASVASNASAPLHIP 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,340
Number of Sequences: 336
Number of extensions: 2839
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)