Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0380
(551 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 57 1e-08
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 56 2e-08
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 56 3e-08
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 52 2e-07
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 52 4e-07
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 52 4e-07
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 50 1e-06
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 50 2e-06
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 49 2e-06
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 49 3e-06
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 48 4e-06
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 48 4e-06
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 48 5e-06
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 48 7e-06
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 47 9e-06
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 46 2e-05
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 46 2e-05
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 46 3e-05
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 45 4e-05
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 44 8e-05
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 44 8e-05
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 44 1e-04
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 43 1e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 41 6e-04
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.007
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 37 0.010
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.013
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.022
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 35 0.038
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 35 0.051
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 34 0.089
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 32 0.27
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.36
SB_20269| Best HMM Match : SOCS_box (HMM E-Value=4.6e-05) 31 0.47
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_35258| Best HMM Match : LEA_4 (HMM E-Value=1.8) 31 0.63
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_55199| Best HMM Match : PKD (HMM E-Value=0.75) 29 2.5
SB_21223| Best HMM Match : I-set (HMM E-Value=2.8e-11) 29 3.3
SB_33019| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_58157| Best HMM Match : RVT_1 (HMM E-Value=1.6e-36) 27 7.7
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIAL-YQTQRVDNKYICGGTLVSHRHIITAAHCVTRK--GSQR--L 181
++ G T G WPWQ+ + Y+T +ICGG++V+ + I+TAAHCVT K G+ R +
Sbjct: 1783 IVGGKVTEHGAWPWQVQIGYKTMG----HICGGSIVNSQWIVTAAHCVTTKPPGASRYTM 1838
Query: 182 VNKDTLTVYLGKHNLRTSVDGVQINSSVK 268
L V LG+H L +DG + N ++
Sbjct: 1839 YAFSDLNVTLGEHQL-YQLDGSEQNIPIE 1866
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIAL-YQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKD 193
V+NGV WPWQI+L +++ D+ + CGG+L+ ++TAAHCV + N
Sbjct: 38 VINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVA-----GIRNPR 92
Query: 194 TLTVYLGKHNL 226
+VY+G H L
Sbjct: 93 RYSVYVGAHEL 103
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
V+ G + G WPWQIAL + +ICGG+LVS ++TAAHCV R N
Sbjct: 477 VIGGKDAIPGAWPWQIAL----KSRGNFICGGSLVSSTWVVTAAHCVARSS-----NPAQ 527
Query: 197 LTVYLGKHN 223
+ +G+HN
Sbjct: 528 YQIIVGEHN 536
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACLWP 381
V ++I HP+YN S D++++EL S V P CL P
Sbjct: 549 VKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPVCLPP 589
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/92 (34%), Positives = 48/92 (52%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++ GV G WPWQ+AL ++ CGG+LV+ ++TA HC S ++ +
Sbjct: 54 IVGGVEAAPGAWPWQVALL----MNGTQFCGGSLVNENWVVTARHCFHELWSS--MDTAS 107
Query: 197 LTVYLGKHNLRTSVDGVQINSSVK**YTQNTT 292
T LG+H+L TS Q + S +TQ TT
Sbjct: 108 WTASLGEHHLVTSEGFEQSSRSNALSFTQRTT 139
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 54.0 bits (124), Expect = 8e-08
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
V+NG + WPWQI+L RV+ ++ICGG+L++ ++TAAHCV R +
Sbjct: 32 VVNGDNAQQHSWPWQISL----RVNGRHICGGSLIAKDWVVTAAHCVDRNPT-----PSG 82
Query: 197 LTVYLGKHNLRTSVDGVQ 250
TV +G H+ RT VQ
Sbjct: 83 YTVVVGAHH-RTGNTPVQ 99
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 54.0 bits (124), Expect = 8e-08
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 RPIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRL 181
RP+ ++ G G WPWQ+ L + CGGTLV+ +ITAAHCV K
Sbjct: 626 RPLSRIVGGSTAPPGAWPWQVMLIYNS---GRQFCGGTLVTPEWVITAAHCVVDK----- 677
Query: 182 VNKDTLTVYLGKHNLRTSVD-GVQINSSVK 268
N ++ V LG + RTS D V++ S++
Sbjct: 678 -NPASIQVRLGAQD-RTSPDPSVEMRISIR 705
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIAL-YQT-QRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNK 190
+ G ++ G +PWQ+AL + T Q N + CGGTL++ ++TAAHCV K S +
Sbjct: 1161 IYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDSG--IPY 1218
Query: 191 DTLTVYLGKHNL 226
L V+LG H++
Sbjct: 1219 HGLRVFLGVHDI 1230
Score = 32.7 bits (71), Expect = 0.21
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +1
Query: 268 IIIHPEYNASTFSRDVSILELKERVSYSKWVQPACL 375
I HP ++ T+ D++++ L+ + + +++V+P CL
Sbjct: 1247 IYSHPRFSWRTYDSDIALIRLRWKANITEYVRPVCL 1282
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
V+NG + WPWQI+L RV+ ++ICGG+L++ ++TAAHCV
Sbjct: 81 VVNGDNAAQHSWPWQISL----RVNGRHICGGSLITPEWVLTAAHCV 123
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACLWPSNSRSHL 402
++++ H +++ S DV++L+L + S V CL NSR+ +
Sbjct: 146 LTKLFKHKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLPERNSRAQV 193
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
+++G WPW + + +N + CGGTLVS + ++TAAHCV + N +
Sbjct: 352 IISGSDAQPNSWPWMVQI----NYNNGHHCGGTLVSPQWVVTAAHCVDHVKDPK--NYNE 405
Query: 197 LTVYLGKHNLRTSVDGVQINSSV 265
L + LG+H R++ +G + SV
Sbjct: 406 LAITLGEHK-RSASEGTEQRFSV 427
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 259 VSQIIIHPEY-NASTFSRDVSILELKERVSYSKWVQPACL 375
V++II+HP+Y + + D+++++L + +K+V ACL
Sbjct: 427 VARIIVHPQYFEPTAINNDIALIKLNKPARLNKYVNLACL 466
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++ GV + EG WPWQ+AL ++++ +C G+L+ R IITA HC K + + D
Sbjct: 54 IVGGVVSSEGLWPWQVALL----LNDRQVCAGSLIEARWIITAGHCF--KDPRSSADPDK 107
Query: 197 LTVYLGKHNLRTS 235
V LG+ +S
Sbjct: 108 WKVLLGERRRHSS 120
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 50.8 bits (116), Expect = 7e-07
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
++NG WPWQI+L Q +R ++CGG L+S R ++TA+HC+
Sbjct: 846 IINGQNAQPHSWPWQISLRQGRRF---HLCGGALISDRWVVTASHCI 889
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
V+ G WPWQI+L RV K++CGGTL+S ++TA HCV
Sbjct: 436 VIGGEDAAPHSWPWQISL----RVRGKHMCGGTLISPDWVLTAGHCV 478
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +2
Query: 5 PIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLV 184
P ++ G + G+WPWQ L + K CGG LV ++TA+HC+ R
Sbjct: 207 PASRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCI---NDIRPE 263
Query: 185 NKDTLTVYLGKHNLRTSVDGVQ 250
+ T + LG HN +T + V+
Sbjct: 264 DYKTHIISLGGHN-KTGIMSVE 284
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 259 VSQIIIHPEYNA--STFSRDVSILELKERVSYSKWVQPACL 375
+++I +H +YN ++ DV+++ L + +++VQP CL
Sbjct: 289 IAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVCL 329
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
V+NG + WPWQI+L R + ++ICGG+L++ ++TAAHCV
Sbjct: 38 VVNGANAPQHAWPWQISL----RTNGQHICGGSLITPEWVLTAAHCV 80
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +2
Query: 2 RPIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRL 181
RP ++ G +G WPWQ L T CGG+L+ + ++TA HCV+ S+R
Sbjct: 659 RPSTRIVGGTAAKQGDWPWQAQLRSTSGFP---FCGGSLIHPQWVLTATHCVS---SRRP 712
Query: 182 VNKDTLTVYLGKHNLRTSV 238
+ L + LG HN R ++
Sbjct: 713 TD---LNIRLGAHNRRANL 728
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +2
Query: 56 WQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTVYLGKHNLRTS 235
+QIAL ++ +ICGG+LVS ++TAAHC+ GS + +T G+H +R S
Sbjct: 81 FQIALERS----GSFICGGSLVSPTWVVTAAHCIA--GSSHTPSYKVVT---GEH-IRNS 130
Query: 236 VDGVQINSSVK 268
+G + VK
Sbjct: 131 PEGTEQTHDVK 141
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYS 351
V +II HP YN+ S D++++EL V S
Sbjct: 140 VKRIITHPTYNSPQLSNDIALIELSSPVPLS 170
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQR---LVN 187
++ G WPWQ L + +D+ +CGG+L++ ++TAAHC+ R R +V
Sbjct: 433 IVGGQTAKVEDWPWQAGL--KKGLDDTIVCGGSLINREWVVTAAHCIDRNNPSRTGCVVP 490
Query: 188 KDTLTVYLGKHNLRTSVDGVQINSSV 265
+ V LG+ ++ T +G +I+ V
Sbjct: 491 DPPIRVILGESDV-TKHEGNEIHRDV 515
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++NG WPWQI+L + + CGG+L+S R ++TAAHC+ R N
Sbjct: 106 IINGQNAQPHSWPWQISL---RGRSGFHTCGGSLISDRWVVTAAHCIHRN-----KNPGG 157
Query: 197 LTVYLGKHNLRTS 235
TV +G H R S
Sbjct: 158 YTVVVGAHKKRGS 170
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTR-KGSQRLVNKD 193
++NG WPWQI+L + + CGG+L+S R ++TAA + R K N
Sbjct: 429 IINGQNAQPHSWPWQISL---RGRSGFHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPG 485
Query: 194 TLTVYLGKHNLRTS 235
TV +G H R S
Sbjct: 486 GYTVVVGAHKKRGS 499
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSY 348
+SQII HP+YN D+++LEL V +
Sbjct: 179 LSQIIEHPKYNDRRIVNDIALLELATPVQF 208
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSY 348
+SQII HP+YN D+++LEL V +
Sbjct: 508 LSQIIEHPKYNDRRIVNDIALLELATPVQF 537
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +2
Query: 8 IPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
+P+++ G G+WPWQ+++ + +ICGG ++S ++TAAHCV
Sbjct: 543 MPMIMGGANAEHGEWPWQVSM-KLNSSSLPHICGGNVISPWWVLTAAHCV 591
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACL 375
V +II H Y+ +T D ++L+L ++++++VQP CL
Sbjct: 620 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL 658
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +2
Query: 2 RPIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRL 181
RP ++ G G WPWQ L T CGG+L++ + I+TA HCV RK + +
Sbjct: 6 RPNTRIVGGTAAKHGDWPWQAQLRTTSGFP---YCGGSLIAPQWILTATHCVERKQASSI 62
Query: 182 V 184
V
Sbjct: 63 V 63
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++ G G WPW A+Y V + CGG L++ ++TAAHC G ++V D
Sbjct: 724 IVGGREAKAGAWPWLAAIY----VKGSFRCGGALIARDWVVTAAHCFYYDG--KIVPSDI 777
Query: 197 LTVYLGKHNLRTSVDGVQIN 256
L V LG+H+ RT +G + N
Sbjct: 778 L-VRLGEHD-RTLEEGSEQN 795
Score = 33.9 bits (74), Expect = 0.089
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 190 GHADRVLGKTQSQNFRRRRAD*FVSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPA 369
G DR L + QN R S +++HP N + DV++++LK V + +V+
Sbjct: 782 GEHDRTLEEGSEQNVR-------ASNLVLHPLANKNGLDFDVALIQLKGGVKLTAYVRTV 834
Query: 370 CL 375
CL
Sbjct: 835 CL 836
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIAL-YQTQRVDNK-YICGGTLVSHRHIITAAHCVTRKGSQRLVNK 190
++ G +G WPWQI++ Y +V +ICGG++V+ I+TAAHC K
Sbjct: 104 IVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDA----K 159
Query: 191 DTLTVYLGKHNLRTSVDGVQINSSVK 268
D T+ +G+H+L + DG + V+
Sbjct: 160 D-YTIAVGEHDL-NATDGYEQRPDVE 183
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 259 VSQIIIHPEYNA-STFSRDVSILELKERVSYSKWVQPACL 375
V +II+HP+Y + DV++++L + Y+ V+P CL
Sbjct: 182 VERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCL 221
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++ G + WPWQ+++ R+ +ICGG+L+S ++TAAHCV R N
Sbjct: 31 IVGGDEAVPHSWPWQVSI----RLKGSHICGGSLLSPLWLLTAAHCVIRSN-----NSAD 81
Query: 197 LTVYLGKHNLRTSVDGVQ 250
TV +G H + +DG +
Sbjct: 82 YTVIVGAH--KRVLDGTE 97
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 48.4 bits (110), Expect = 4e-06
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKY-ICGGTLVSHRHIITAAHC 154
++ G G WPWQ+ +Y+ N+ ICGG L++ ++TAAHC
Sbjct: 127 IVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +2
Query: 2 RPIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKG 169
+P ++ G G WPWQ L CGGTLV + +ITAAHCV R+G
Sbjct: 135 KPHTRIVGGTKAPPGAWPWQAMLRSNY---GGQFCGGTLVHPQWVITAAHCVYRRG 187
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
V+NG WPWQI+L R + CGGTL+S R ++TA+HCV
Sbjct: 30 VINGQNAQPHSWPWQISLRPYGRYHS---CGGTLISDRWVVTASHCV 73
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++NG + WPW +L + + N + CG TL+ ITAAHCV R D
Sbjct: 326 IVNGQEAVSHSWPWIASLRKGR--SNYHTCGATLIRPGWAITAAHCVMR--------PDK 375
Query: 197 LTVYLGKHNLRTSVDGVQ 250
TV +G H+ S Q
Sbjct: 376 YTVIVGSHSRDASEPSAQ 393
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSK--WVQPACL 375
VS +I HPEY+ D+++LEL V + + V ACL
Sbjct: 154 VSHVIEHPEYDDRKIKNDIALLELSRPVKFDREGKVGTACL 194
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++ P+ WPWQ + +R C G L+S RH+ITAAHC R++ D
Sbjct: 1088 LVGATPSPPEDWPWQTMILNRRRFP---FCSGVLISARHVITAAHCF-----DRIIRTDQ 1139
Query: 197 LTVYLGKHNLRT 232
+ V LG + R+
Sbjct: 1140 IIVRLGAYIARS 1151
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 47.6 bits (108), Expect = 7e-06
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 5 PIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
P V++G L G+WPWQ L+ +ICGG+LV+ ++TAAHC+
Sbjct: 28 PATRVISGSEALLGEWPWQAWLHLQH---TGFICGGSLVAPGWVLTAAHCI 75
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 47.2 bits (107), Expect = 9e-06
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2
Query: 2 RPIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRL 181
RP ++ G + WPWQ L T CGG+L+ + I+TA HCV+ K + +
Sbjct: 49 RPHTRIVGGTAAKQNSWPWQAQLRTTSGFP---YCGGSLIHPQWILTATHCVSGKSASSI 105
Query: 182 VNKDTLTVYLGKHNLRTSVDGVQ 250
V ++ V L N+ DG +
Sbjct: 106 VIRNVNLVCL-PDNVPALSDGTR 127
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++ G T++G +PW + + R CGG+L+S + ++TAAHCVT + ++ +
Sbjct: 108 IVGGHDTVKGAYPWHVLI----RKGGHVACGGSLISEKWVLTAAHCVTHRNG-NILPRSR 162
Query: 197 LTVYLG 214
V LG
Sbjct: 163 FQVQLG 168
Score = 33.9 bits (74), Expect = 0.089
Identities = 13/48 (27%), Positives = 30/48 (62%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACLWPSNSRSHL 402
+S+I HP+++ F D+++++L S++V+P CL ++ ++ L
Sbjct: 185 ISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPICLPETDDQASL 232
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
++ G G WPWQ L + + + CGGTLV R ++TA+HCV
Sbjct: 249 IVGGTTAQRGAWPWQAML---RYYNGNHFCGGTLVHPRWVVTASHCV 292
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHC 154
++ G G+WPWQ++LY T +CGGTL++ ++TAA C
Sbjct: 258 IIGGTDAAVGEWPWQVSLYLTHYGP---VCGGTLLTSEWVLTAARC 300
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/89 (29%), Positives = 40/89 (44%)
Frame = +2
Query: 2 RPIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRL 181
+P ++ G + WPWQ Q + CGGTLV R ++TA+HC+ +K
Sbjct: 19 KPSTRIVGGTAAPKNAWPWQA---QLRSASGFPFCGGTLVHPRFVVTASHCIDKK----- 70
Query: 182 VNKDTLTVYLGKHNLRTSVDGVQINSSVK 268
+L + LG H S + + VK
Sbjct: 71 -TPSSLRIRLGAHRRAESGESTVQDFRVK 98
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
V++G WPWQ+ L Q++ + CGG L+ ++TAAHCV
Sbjct: 44 VVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHCV 90
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 45.6 bits (103), Expect = 3e-05
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTR 163
++ G+ + G WPWQ AL+ + CGG+++ + ++TAAHC ++
Sbjct: 27 IVGGIESANGAWPWQAALFLN---GTHHRCGGSVIKSQWVVTAAHCFSK 72
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/54 (31%), Positives = 34/54 (62%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQR 178
V++G G+WPWQ L+ T + ++CGG+L++ + ++TA HC+ + ++
Sbjct: 62 VVSGDDATLGEWPWQAWLHVTP---HGFVCGGSLIAPQWVLTAGHCILTEDPEK 112
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGS 172
++NG + WPWQ++L RV + CG +L+S +TAAHCV R +
Sbjct: 86 IINGEEAVPNSWPWQLSL----RVYGSHNCGASLLSPGWALTAAHCVQRSSN 133
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACL 375
VSQ+I H E++ DV++L L V S + CL
Sbjct: 157 VSQVISHKEFSMGHLRNDVTLLRLSAPVQLSDKIGTICL 195
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +2
Query: 5 PIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLV 184
P+ ++ G WPWQ + + CGGTL+ ++TAAHCV + +
Sbjct: 281 PMSRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQN-----I 335
Query: 185 NKDTLTVYLGKHNLRTSVDGVQI 253
+ LG H+ +S + I
Sbjct: 336 EPSNYKIKLGAHDRESSEGALTI 358
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 5 PIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
P+ V+ G WPWQ+++ + + CGG L+S + +ITAAHCV
Sbjct: 473 PMSRVIGGEAARPYSWPWQVSV----SMGKLHSCGGALISSKWVITAAHCV 519
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++ G G WPWQ L T CGG+L+ ++TAAHC++ K +V +
Sbjct: 391 IVGGAAANPGDWPWQAQLRTTTGFP---YCGGSLIHSNWVLTAAHCISSKRPAEVVVRLG 447
Query: 197 LTVYLGKHNLRTSVDGVQINSSV 265
LG +L T + +++++ +
Sbjct: 448 AHSRLG--SLTTDMQDIKVSAII 468
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
++ G + + WPWQ A+Y R N ++ G L+ R ++T A+ V R G R +
Sbjct: 93 IVGGKISAKAAWPWQAAIYYKDRGRN-FLFNGALIKSRWVLTVANAVLRGG--RPIKPRK 149
Query: 197 LTVYLGK 217
L V LGK
Sbjct: 150 LKVILGK 156
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDT 196
V+ G GQ+PWQIAL ++ +Y CGG LV R ++T AHC S+ +
Sbjct: 29 VVGGDEAKAGQFPWQIALLFKRQ---QY-CGGALVHERWVVTGAHCFNPYTSE---DPRD 81
Query: 197 LTVYLGKHNL 226
V LG++NL
Sbjct: 82 WNVTLGEYNL 91
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVT 160
++NG + WPWQ++ R +ICG +L++ +TAAHC+T
Sbjct: 241 IVNGEDAVPHSWPWQLSF----RYKGSHICGASLLTPGWALTAAHCLT 284
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 41.1 bits (92), Expect = 6e-04
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 2 RPIPLVLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRK 166
+P P ++ G WPWQ+ L ++ CGG+L+ + ++T+ HC ++
Sbjct: 245 KPQPRIVGGREASPNSWPWQVDLVVN---GTRHNCGGSLIDKQWVVTSGHCFDQR 296
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 39.5 bits (88), Expect = 0.002
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACL 375
+ I +HP+YN+S+ D+++L+L++ ++ V P C+
Sbjct: 1313 IKAIFVHPQYNSSSHEHDLAVLQLQQPAEFNSRVSPICI 1351
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 41 EGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTR 163
+ WPWQ+AL + + CGG L++ ++TAAHC R
Sbjct: 1247 DDSWPWQVALTLSGNPVQR--CGGALIAADWVLTAAHCFDR 1285
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 208 LGKTQSQNFRRRRAD*FVSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACLWPSN 387
LGK Q + IHP Y+ ++ D++++ L + V+++ +V+P CL PS
Sbjct: 176 LGKHIRQKIEKTEQSYDAEMYKIHPHYSPDSYDSDIALIRLAQPVTFTDYVKPICL-PSA 234
Query: 388 SRSHLN*LLYGRRDQWLAGALMRQEWRQK 474
+ + L ++G R+ WR +
Sbjct: 235 ASDYAQ--LQANVSGTISGWGKRKLWRDR 261
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
++ G WPWQ L ++ D CGG+L+ ++TAAHC+
Sbjct: 30 IVGGTEAPINGWPWQAMLLRSPNGDQ--FCGGSLIDPGWVLTAAHCL 74
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 74 QTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTVYLGKHNLRTSVDGVQ 250
+T ++ +ICGG+L+S ++TAAHCV R N TV +G H + +DG +
Sbjct: 330 KTATLNGHHICGGSLLSSTWVLTAAHCVIRSH-----NTSDYTVIVGAH--KRVLDGTE 381
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 5 PIPLVLNGVPTLEGQWPWQI-ALYQTQRVDNKYICGGTLVSHRHIITAAHC 154
P ++ G WPWQ+ + +T + Y CGG+L+ I+T++HC
Sbjct: 242 PESRIVGGREAPRNSWPWQVEIILKTPNLTTHY-CGGSLIDPYWILTSSHC 291
Score = 27.9 bits (59), Expect = 5.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 104 CGGTLVSHRHIITAAHCV 157
CGG+++ ++TA HCV
Sbjct: 10 CGGSIIDPHWVVTAGHCV 27
Score = 27.5 bits (58), Expect = 7.7
Identities = 7/24 (29%), Positives = 17/24 (70%)
Frame = +2
Query: 95 KYICGGTLVSHRHIITAAHCVTRK 166
++ CGG+L+ + ++T+ HC ++
Sbjct: 558 RHNCGGSLIDKQWVVTSGHCFDQR 581
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 104 CGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTVYLGKHNLRTSVDGVQ 250
C GTL+S RH++T+AHCV S+ +++ ++ V + N + GV+
Sbjct: 179 CTGTLISTRHVLTSAHCV-HDSSEYIISAKSVKVGFPRKNGKIRWAGVE 226
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
++ G WPWQ L + CGG+L+ ++TAAHC+
Sbjct: 260 IVGGTEAPVNGWPWQAML---RSAGGSQFCGGSLIHPEWVLTAAHCL 303
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHC 154
++ G + Q PW +A+ +D+ CGG+LV I+TAAHC
Sbjct: 41 IMGGQRSTIEQHPWMVAMM----LDSAQACGGSLVPEDWIVTAAHC 82
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCV 157
++ G WPWQ L + CGG+L+ ++TAAHC+
Sbjct: 220 IVGGTEAPVNGWPWQAML---RSAGGSQFCGGSLIHPEWVLTAAHCL 263
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACL 375
V +II H Y+ +T D ++L+L ++++++VQP CL
Sbjct: 371 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL 409
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 35.5 bits (78), Expect = 0.029
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 CGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTV-YLGKHNLRTSVDGVQ 250
C GTLVS RH++TAAHC+ G TL V +L ++ VD VQ
Sbjct: 168 CTGTLVSPRHVLTAAHCL-HTGRDYTKGFRTLRVGFLLRNRTFQWVDAVQ 216
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 35.1 bits (77), Expect = 0.038
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 104 CGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTV 205
C GTL+S +H++T+AHCV G L L V
Sbjct: 168 CSGTLISRQHVLTSAHCV-HNGKSYLQRTSALRV 200
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACL 375
V Q+I+HP Y T DV++L L + +K V CL
Sbjct: 1405 VRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICL 1443
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 34.7 bits (76), Expect = 0.051
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACLWPSNS 390
V +++ +P +N + D+++LEL+ V + V P CL P N+
Sbjct: 17 VKKLVYNPGFNERHYRNDIALLELERPVLTNPHVSPVCLPPVNA 60
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 32 PTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTVYL 211
P WPW L+ +D + C GTLV I+T AHC+ G+ +L + V L
Sbjct: 670 PAHANSWPWTALLHFGGFLDIEG-CMGTLVDQEWIMTTAHCL-HVGAYQL-QPQFIKVEL 726
Query: 212 GKH 220
G H
Sbjct: 727 GVH 729
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 104 CGGTLVSHRHIITAAHCVTRKGSQRL 181
C G LV +H++TAAHCV + L
Sbjct: 124 CTGVLVGPKHVLTAAHCVANEKPHNL 149
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 32.3 bits (70), Expect = 0.27
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 104 CGGTLVSHRHIITAAHCV 157
C GTL+ H+ITAAHC+
Sbjct: 153 CSGTLIGPCHVITAAHCI 170
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 190 GHADRVLGKTQSQNFRRRRAD*FVSQIIIHPEYNAS-TFSRDVSILELKERVSYSKWVQP 366
G+ LG + + D VS++I+HP Y T + D+++L+L++ + + V
Sbjct: 164 GNKGNTLGAHKRTSNIGTEQDIKVSKVILHPSYGKPVTLAHDIALLKLEKSATVNNNVHT 223
Query: 367 ACL 375
CL
Sbjct: 224 VCL 226
>SB_20269| Best HMM Match : SOCS_box (HMM E-Value=4.6e-05)
Length = 302
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 354 MGSASLSLAQ-QFKITPQLIIVWKKGSVVGWGFDETGVATEELTWWENAR 500
MG ++ + +FK +V G VGW F++ G AT EL WE R
Sbjct: 186 MGQVAVCVVPAKFKEGKNFNLVPYIGHCVGWCFNQVGRATYELPLWEEKR 235
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 259 VSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACLWPSNSRSHL 402
+S+I HP ++ +T D++IL L V + V CL +R+ L
Sbjct: 34 ISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQGARASL 81
>SB_35258| Best HMM Match : LEA_4 (HMM E-Value=1.8)
Length = 291
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +2
Query: 38 LEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTVYLGK 217
L+G + +Y+ QR +C + + A H +TR + TVY+ +
Sbjct: 2 LQGTTQYTHNIYKAQRNTRTTVCKAQRNTRTTVYKAQH-ITRTTVYMAQHNTRTTVYMAQ 60
Query: 218 HNLRTSVDGVQINSSVK**YTQNTTR 295
N RT+V Q N+ Q TR
Sbjct: 61 RNTRTTVYKAQRNTRTTVYKAQRNTR 86
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = +2
Query: 68 LYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTVYLGKHNLRTSVDGV 247
+Y+ QR +C + R + A TR + + TVY+ +HN RT+V
Sbjct: 100 VYKAQRNTRTTVCKAQR-NTRTTVCKAQRNTRTTVCKAQHITRTTVYMAQHNTRTTVYKA 158
Query: 248 QINSSVK**YTQNTTR 295
Q N+ Q+ TR
Sbjct: 159 QRNTRTTVYKAQHITR 174
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 30.7 bits (66), Expect = 0.83
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Frame = +2
Query: 104 CGGTLVSHRHIITAAHCVTRKGS---QRLVNKD-------TLTVYLGKHNLRTSVDG 244
C G LVS R ++TAA C+ + S R+ D LTV +G H++ S G
Sbjct: 52 CSGALVSPRWVVTAASCLKQSSSPFISRVKTDDGFTNFELALTVRIGNHHVDISTPG 108
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 259 VSQIIIHPEY-NASTFSRDVSILELKERVSYSKWVQPACL 375
VS + +H + + D+++++LK+RV S+ V+P CL
Sbjct: 189 VSAVRLHRGFLTKDGWGNDIALIQLKKRVRRSRLVRPICL 228
>SB_55199| Best HMM Match : PKD (HMM E-Value=0.75)
Length = 462
Score = 29.1 bits (62), Expect = 2.5
Identities = 28/130 (21%), Positives = 55/130 (42%)
Frame = +1
Query: 16 SSERGPDVRRSMALADRLIPDSESRQQIHMRRNACVTPPHHHGGTLRHKEGLSTTREQGH 195
SS+R P+V + +RL+P + + RRN+ P G + + G S T
Sbjct: 59 SSKRSPNVESLKLVGERLLPLKLDKMSQNNRRNSGPKPT----GCTKGESGTSCTLRDSK 114
Query: 196 ADRVLGKTQSQNFRRRRAD*FVSQIIIHPEYNASTFSRDVSILELKERVSYSKWVQPACL 375
+V + + + F +QI + NA ++D + +LK + + +P +
Sbjct: 115 LQKVFIQHSLKAVLEKET--FATQIAEQAKNNA---AKDALLAQLKREIEQAN-ARPLAV 168
Query: 376 WPSNSRSHLN 405
+ S + L+
Sbjct: 169 SQTTSNTRLH 178
>SB_21223| Best HMM Match : I-set (HMM E-Value=2.8e-11)
Length = 90
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 387 FKITPQLIIVWKKGSVVGWGFDETGVATEELTWWENARG 503
F TPQ + GSV+ W TG T LTW +N +G
Sbjct: 2 FTRTPQDTAI-DLGSVLLWHCTATGYPTPVLTWQKNGQG 39
>SB_33019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 877
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/55 (20%), Positives = 26/55 (47%)
Frame = +1
Query: 319 ILELKERVSYSKWVQPACLWPSNSRSHLN*LLYGRRDQWLAGALMRQEWRQKSSP 483
++E K +++ W++ +WP++ R N ++ + L + +K SP
Sbjct: 288 MVEYKHPLAHFNWMEYRAIWPTSGRDFCNYVVMREVTEGLFAVAAQSNVERKESP 342
>SB_58157| Best HMM Match : RVT_1 (HMM E-Value=1.6e-36)
Length = 1092
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 80 QRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRLVNKDTLTV-YLGKHNL 226
Q+ +NK T +SH+ C R GS+R + L LG++N+
Sbjct: 18 QKAENKSQRSATQMSHKSPTNCTTCQMRGGSERPERRTALVASELGRYNI 67
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,512,065
Number of Sequences: 59808
Number of extensions: 387941
Number of successful extensions: 1184
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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