BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0380
(551 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 38 7e-05
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 1.6
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 1.6
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 3.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 3.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 4.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 4.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 4.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 4.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 4.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 6.3
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 8.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 8.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 8.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.3
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 37.9 bits (84), Expect = 7e-05
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 17 VLNGVPTLEGQWPWQIALYQTQRVDNKYICGGTLVSHRHIITAAHCVTRKGSQRL 181
++ G T ++P + +T + ICG T++S R+++TAAHC+ + + +L
Sbjct: 161 IVGGTNTGINEFPMMAGIKRTY--EPGMICGATIISKRYVLTAAHCIIDENTTKL 213
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.4 bits (48), Expect = 1.6
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 280 PEYNASTFSRDVSILELKERVSYSKWVQPACLWPSNSRSHLN*LLYGRRDQWLAGALMRQ 459
PEY F DV EL Y + + P W S+S+ H+ + G+ +L LM +
Sbjct: 217 PEYKLDYFMEDV---ELNAYYYYMREMLP--YWMSSSQYHMPKEIRGQLYYFLHKQLMTR 271
Query: 460 EWRQKSS 480
+ ++ S
Sbjct: 272 YFLERMS 278
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.4 bits (48), Expect = 1.6
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 280 PEYNASTFSRDVSILELKERVSYSKWVQPACLWPSNSRSHLN*LLYGRRDQWLAGALMRQ 459
PEY F DV EL Y + + P W S+S+ H+ + G+ +L LM +
Sbjct: 217 PEYKLDYFMEDV---ELNAYYYYMREMLP--YWMSSSQYHMPKEIRGQLYYFLHKQLMTR 271
Query: 460 EWRQKSS 480
+ ++ S
Sbjct: 272 YFLERMS 278
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 432 VVGWGFDETGVATEELTW 485
VVG F+ + TEEL W
Sbjct: 420 VVGKWFNSLDIRTEELIW 437
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 432 VVGWGFDETGVATEELTW 485
VVG F+ + TEEL W
Sbjct: 510 VVGKWFNSLDIRTEELIW 527
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 103 MRRNACVTPPHHHGGTLRHKEGLSTTREQGHADRVLGKTQSQNFRRRR 246
M+RN T H H H E +R + + +TQ + RRRR
Sbjct: 1 MKRN---TTNHSH-----HDERFRQSRSEDSETGLRSRTQEERLRRRR 40
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 103 MRRNACVTPPHHHGGTLRHKEGLSTTREQGHADRVLGKTQSQNFRRRR 246
M+RN T H H H E +R + + +TQ + RRRR
Sbjct: 1 MKRN---TTNHSH-----HDERFRQSRSEDSETGLRSRTQEERLRRRR 40
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 103 MRRNACVTPPHHHGGTLRHKEGLSTTREQGHADRVLGKTQSQNFRRRR 246
M+RN T H H H E +R + + +TQ + RRRR
Sbjct: 1 MKRN---TTNHSH-----HDERFRQSRSEDSETGLRSRTQEERLRRRR 40
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 103 MRRNACVTPPHHHGGTLRHKEGLSTTREQGHADRVLGKTQSQNFRRRR 246
M+RN T H H H E +R + + +TQ + RRRR
Sbjct: 1 MKRN---TTNHSH-----HDERFRQSRSEDSETGLRSRTQEERLRRRR 40
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 103 MRRNACVTPPHHHGGTLRHKEGLSTTREQGHADRVLGKTQSQNFRRRR 246
M+RN T H H H E +R + + +TQ + RRRR
Sbjct: 1 MKRN---TTNHSH-----HDERFRQSRSEDSETGLRSRTQEERLRRRR 40
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 103 MRRNACVTPPHHHGGTLRHKEGLSTTREQGHADRVLGKTQSQNFRRRR 246
M+RN T H H H E +R + + +TQ + RRRR
Sbjct: 1 MKRN---TTNHSH-----HDERFRQSRSEDSETGLRSRTQEERLRRRR 40
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 103 MRRNACVTPPHHHGGTLRHKEGLSTTREQGHADRVLGKTQSQNFRRRR 246
M+RN T H H H E +R + + +TQ + RRRR
Sbjct: 1 MKRN---TTNHSH-----HDERFRQSRSEDSETGLRSRTQEERLRRRR 40
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 103 MRRNACVTPPHHHGGTLRHKEGLSTTREQGHADRVLGKTQSQNFRRRR 246
M+RN T H H H E +R + + +TQ + RRRR
Sbjct: 1 MKRN---TTNHSH-----HDERFRQSRSEDSETGLRSRTQEERLRRRR 40
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 328 LKERVSYSKWVQPACLWPSNSRSH 399
L ++ + KW+Q LW ++S ++
Sbjct: 645 LLDKFFFPKWLQVLALWLNHSPNY 668
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +1
Query: 445 ALMRQEWRQKSSPGGRMPVGDMKPLP 522
A +R+E + ++ PG P+ +P P
Sbjct: 30 ARLRREAKPEAEPGNNRPIYIPQPRP 55
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 451 MRQEWRQKSSPGGRMPVGDMKPLP 522
+R+E K+ PG P+ +P P
Sbjct: 60 LRREAEPKAEPGNNRPIYIPQPRP 83
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 366 SLSLAQQFKITPQLIIVWKKGSVV 437
SL +A T L+ +WK+G V
Sbjct: 175 SLRMASYGWTTDDLVFLWKEGDPV 198
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 366 SLSLAQQFKITPQLIIVWKKGSVV 437
SL +A T L+ +WK+G V
Sbjct: 175 SLRMASYGWTTDDLVFLWKEGDPV 198
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 60 RSPYTRLRE*TTNTYAEER 116
R+ Y+R RE N+Y ER
Sbjct: 36 RNRYSRSREREQNSYKNER 54
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 60 RSPYTRLRE*TTNTYAEER 116
R+ Y+R RE N+Y ER
Sbjct: 36 RNRYSRSREREQNSYKNER 54
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 60 RSPYTRLRE*TTNTYAEER 116
R+ Y+R RE N+Y ER
Sbjct: 36 RNRYSRSREREQNSYKNER 54
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 60 RSPYTRLRE*TTNTYAEER 116
R+ Y+R RE N+Y ER
Sbjct: 36 RNRYSRSREREQNSYKNER 54
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 60 RSPYTRLRE*TTNTYAEER 116
R+ Y+R RE N+Y ER
Sbjct: 36 RNRYSRSREREQNSYKNER 54
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 60 RSPYTRLRE*TTNTYAEER 116
R+ Y+R RE N+Y ER
Sbjct: 36 RNRYSRSREREQNSYKNER 54
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 60 RSPYTRLRE*TTNTYAEER 116
R+ Y+R RE N+Y ER
Sbjct: 36 RNRYSRSREREQNSYKNER 54
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.3
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +3
Query: 204 CTWENTISELPSTACRLIRQSNNNT 278
C +SE T+C+ + + N+T
Sbjct: 17 CLASTILSESAGTSCKWLSEGGNDT 41
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,981
Number of Sequences: 438
Number of extensions: 3551
Number of successful extensions: 51
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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