Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0379
         (976 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   2.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   4.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   6.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   8.3  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 701 GGRXHPPMGNXKIPGA 654
           GG  HP  G+ ++PGA
Sbjct: 134 GGPKHPDPGSLQVPGA 149


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 382 IDPPDPYGVLSLWRSNDLNLHLSXGREL 465
           I PPD  G+L L R  + +L +   R++
Sbjct: 63  ITPPDLEGILDLGRHENFSLFIPKHRKV 90


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 299 FCVQWRGQTRRTLVSRSTFV 358
           F  QW+ Q   TLVS S F+
Sbjct: 176 FHPQWKWQVYMTLVSLSLFI 195


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 519 GNTGGXVQSPYDVPSHFMKEVYC 587
           G+    VQ     P+ F+KE YC
Sbjct: 61  GSCKSQVQPSVITPTGFLKECYC 83


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 318 PLHCTQKCF*THRGSLP 268
           P  C Q C  TH+  +P
Sbjct: 559 PADCQQNCMCTHKVDIP 575


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,465
Number of Sequences: 336
Number of extensions: 3640
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27616611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)