Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0379
         (976 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          60   1e-10
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          60   1e-10
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          60   1e-10
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           53   1e-08
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    25   4.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   7.9  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 60.1 bits (139), Expect = 1e-10
 Identities = 45/127 (35%), Positives = 59/127 (46%)
 Frame = -3

Query: 680 MGNXKIPGAQKVFFPTPWFLGYESLRXSXEPTIYLLHKVXGDIVRTLYXTPGIAGXXPMX 501
           +GN +    + +F P+  FLG E+     E T   + K   DI + LY    ++G   M 
Sbjct: 251 IGNERFRCPEALFQPS--FLGMEACGIH-ETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 307

Query: 500 XEFPAGMQKXIHSSRPIDKXXXXXXXXXRESTPYXXXXXXXXXXSTFQQMWISKQEYDES 321
                 MQK I +  P            R+ + +           TFQQMWISKQEYDES
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS-TFQQMWISKQEYDES 366

Query: 320 GPSIVHR 300
           GPSIVHR
Sbjct: 367 GPSIVHR 373


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 60.1 bits (139), Expect = 1e-10
 Identities = 45/127 (35%), Positives = 59/127 (46%)
 Frame = -3

Query: 680 MGNXKIPGAQKVFFPTPWFLGYESLRXSXEPTIYLLHKVXGDIVRTLYXTPGIAGXXPMX 501
           +GN +    + +F P+  FLG E+     E T   + K   DI + LY    ++G   M 
Sbjct: 251 IGNERFRCPEALFQPS--FLGMEACGIH-ETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 307

Query: 500 XEFPAGMQKXIHSSRPIDKXXXXXXXXXRESTPYXXXXXXXXXXSTFQQMWISKQEYDES 321
                 MQK I +  P            R+ + +           TFQQMWISKQEYDES
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS-TFQQMWISKQEYDES 366

Query: 320 GPSIVHR 300
           GPSIVHR
Sbjct: 367 GPSIVHR 373


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 60.1 bits (139), Expect = 1e-10
 Identities = 45/127 (35%), Positives = 59/127 (46%)
 Frame = -3

Query: 680 MGNXKIPGAQKVFFPTPWFLGYESLRXSXEPTIYLLHKVXGDIVRTLYXTPGIAGXXPMX 501
           +GN +    + +F P+  FLG E+     E T   + K   DI + LY    ++G   M 
Sbjct: 251 IGNERFRCPEALFQPS--FLGMEACGIH-ETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 307

Query: 500 XEFPAGMQKXIHSSRPIDKXXXXXXXXXRESTPYXXXXXXXXXXSTFQQMWISKQEYDES 321
                 MQK I +  P            R+ + +           TFQQMWISKQEYDES
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS-TFQQMWISKQEYDES 366

Query: 320 GPSIVHR 300
           GPSIVHR
Sbjct: 367 GPSIVHR 373


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 53.2 bits (122), Expect = 1e-08
 Identities = 42/128 (32%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
 Frame = -3

Query: 680 MGNXKIPGAQKVFFPTPWFLGYESLRXSXEPTIY-LLHKVXGDIVRTLYXTPGIAGXXPM 504
           +GN +    + +F P+  FLG ES       T+Y  + +   DI + LY    ++G   M
Sbjct: 251 IGNERFRAPEALFQPS--FLGMEST--GIHETVYNSIMRCDVDIRKDLYANSVLSGGTTM 306

Query: 503 XXEFPAGMQKXIHSSRPIDKXXXXXXXXXRESTPYXXXXXXXXXXSTFQQMWISKQEYDE 324
                  MQK I S  P            R+ + +           TFQ MWISK EYDE
Sbjct: 307 YPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLS-TFQTMWISKHEYDE 365

Query: 323 SGPSIVHR 300
            GP IVHR
Sbjct: 366 GGPGIVHR 373


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 532 PPVLPGGPXCXXNSPPV 482
           PP +PGGP C    P V
Sbjct: 40  PPGIPGGPACAGLKPMV 56


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 501 P*IPRRYAKXNSQLSPXRQMKIKIIAPPERKYSVWI 394
           P IPR Y   ++  +  +   +  +  P++KY VW+
Sbjct: 371 PYIPRIYDVPSAAQTVVKANAVAPLLVPQKKYIVWL 406


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,405
Number of Sequences: 2352
Number of extensions: 15946
Number of successful extensions: 45
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106474641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)