Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0377
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 163 7e-41
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 163 1e-40
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 160 7e-40
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 157 8e-39
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 78 5e-15
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 78 5e-15
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 78 5e-15
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 78 5e-15
03_01_0034 + 318432-318825,318902-319851 78 5e-15
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 78 5e-15
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 78 5e-15
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 78 5e-15
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 46 2e-05
05_05_0013 - 21509307-21509493,21509762-21510123 34 0.074
03_05_0957 + 29195549-29196706,29198590-29198868 30 1.2
10_06_0084 - 10477880-10477897,10477940-10478002,10479523-104795... 29 2.8
01_01_1149 - 9134390-9134600,9134732-9134790,9135650-9135724,913... 29 2.8
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 3.7
02_05_0316 - 27825871-27826509 29 3.7
09_01_0005 - 193214-193228,193659-193776,193876-194072,194534-19... 28 4.9
01_05_0110 + 18225431-18226992,18227158-18228132,18228343-182284... 28 4.9
01_01_1078 + 8489872-8490168,8490280-8490462,8490667-8490908,849... 28 4.9
12_02_0339 - 17721664-17722407,17722921-17723556 28 6.5
11_01_0355 + 2679561-2680985,2681183-2682295 28 6.5
02_02_0521 - 11156594-11156956,11157097-11157483,11158327-111583... 28 6.5
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 28 6.5
10_08_0842 - 20954712-20957738 27 8.5
07_01_0085 + 663694-665022 27 8.5
06_02_0216 + 13157377-13157583,13159271-13159339,13160727-131608... 27 8.5
05_06_0230 + 26585439-26586608 27 8.5
02_02_0423 - 10064902-10064918,10064919-10064991,10066187-10066546 27 8.5
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 163 bits (397), Expect = 7e-41
Identities = 74/103 (71%), Positives = 81/103 (78%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC++YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPP+VVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGG 366
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCM+SN T +AE KRAFVHWY
Sbjct: 367 DLAKVQRAVCMISNNTAVAE-VFSRIDHKFDLMYAKRAFVHWY 408
Score = 153 bits (372), Expect = 8e-38
Identities = 71/92 (77%), Positives = 80/92 (86%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQ
Sbjct: 226 NLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 285
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSV EITNA FEP++ M KCDPRH ++A C
Sbjct: 286 LSVPEITNAVFEPSSMMAKCDPRHGK-YMACC 316
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 163 bits (395), Expect = 1e-40
Identities = 74/103 (71%), Positives = 81/103 (78%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGG 366
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCM+SN+T + E KRAFVHWY
Sbjct: 367 DLAKVQRAVCMISNSTSVVE-VFSRIDIKFDLMYSKRAFVHWY 408
Score = 154 bits (374), Expect = 4e-38
Identities = 70/92 (76%), Positives = 81/92 (88%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 285
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITN+ FEP++ M KCDPRH ++A C
Sbjct: 286 LSVAEITNSAFEPSSMMAKCDPRHGK-YMACC 316
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 160 bits (389), Expect = 7e-40
Identities = 73/103 (70%), Positives = 80/103 (77%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VVP G
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSG 366
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCM+SN+T + E KRAFVHWY
Sbjct: 367 DLAKVQRAVCMISNSTSVVE-VFSRIDHKFDLMYSKRAFVHWY 408
Score = 154 bits (374), Expect = 4e-38
Identities = 70/92 (76%), Positives = 81/92 (88%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 285
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITN+ FEP++ M KCDPRH ++A C
Sbjct: 286 LSVAEITNSAFEPSSMMAKCDPRHGK-YMACC 316
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 157 bits (380), Expect = 8e-39
Identities = 70/103 (67%), Positives = 79/103 (76%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC++YRGDVVPKDVNAA+ +IKT+RT+QFVDWCPTGFK GINYQPPT VPGG
Sbjct: 388 PRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGG 447
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK +RAVCM+SN T +AE KRAFVHWY
Sbjct: 448 DLAKVRRAVCMISNNTAVAE-VFSRIDRKFDLMYAKRAFVHWY 489
Score = 146 bits (354), Expect = 1e-35
Identities = 66/92 (71%), Positives = 78/92 (84%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLI Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS EKA+HEQ
Sbjct: 307 NLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQ 366
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
SV EITN+ FEPA+ M KCDPRH ++A C
Sbjct: 367 HSVPEITNSVFEPASVMAKCDPRHGK-YMACC 397
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S +
Sbjct: 224 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 283
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T ++ N M DPRH
Sbjct: 284 LTVPELTQQMWDAKNMMCAADPRH 307
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP +
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGL--- 361
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
+ A + N+T I E ++AF+HWY
Sbjct: 362 -----KMASTFIGNSTSIQE-MFRRVSEQFTAMFRRKAFLHWY 398
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S +
Sbjct: 404 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 463
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T ++ N M DPRH
Sbjct: 464 LTVPELTQQMWDAKNMMCAADPRH 487
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/103 (23%), Positives = 43/103 (41%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP +
Sbjct: 485 PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGL--- 541
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
A + N+T I E ++AF+HWY
Sbjct: 542 -----SMASTFVGNSTSIQE-MFRRVSEQFTAMFRRKAFLHWY 578
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S +
Sbjct: 224 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 283
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T ++ N M DPRH
Sbjct: 284 LTVPELTQQMWDAKNMMCAADPRH 307
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP +
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGL--- 361
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
+ A + N+T I E ++AF+HWY
Sbjct: 362 -----KMAATFVGNSTSIQE-MFRRVSEQFTAMFRRKAFLHWY 398
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S +
Sbjct: 240 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 299
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T ++ N M DPRH
Sbjct: 300 LTVPELTQQMWDAKNMMCAADPRH 323
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/103 (23%), Positives = 43/103 (41%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP +
Sbjct: 321 PRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGL--- 377
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
A + N+T I E ++AF+HWY
Sbjct: 378 -----SMASTFVGNSTSIQE-MFRRVSEQFTAMFRRKAFLHWY 414
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S +
Sbjct: 224 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 283
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T ++ N M DPRH
Sbjct: 284 LTVPELTQQMWDAKNMMCAADPRH 307
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P +Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT +
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGL--- 361
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
+ A + N+T I E ++AF+HWY
Sbjct: 362 -----KMASTFIGNSTSIQE-MFRRVSEQFTAMFRRKAFLHWY 398
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S +
Sbjct: 224 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 283
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T ++ N M DPRH
Sbjct: 284 LTVPELTQQMWDAKNMMCAADPRH 307
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP +
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGL--- 361
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
+ A + N+T I E ++AF+HWY
Sbjct: 362 -----KMASTFIGNSTSIQE-MFRRVSEQFTAMFRRKAFLHWY 398
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S +
Sbjct: 245 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 304
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T ++ N M DPRH
Sbjct: 305 LTVPELTQQMWDAKNMMCAADPRH 328
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/103 (23%), Positives = 43/103 (41%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP +
Sbjct: 326 PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGL--- 382
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
A + N+T I E ++AF+HWY
Sbjct: 383 -----SMASTFIGNSTSIQE-MFRRVSEQFTAMFRRKAFLHWY 419
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S +
Sbjct: 224 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 283
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T ++ N M DPRH
Sbjct: 284 LTVPELTQQMWDAKNMMCAADPRH 307
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/103 (23%), Positives = 43/103 (41%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP +
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGL--- 361
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
A + N+T I E ++AF+HWY
Sbjct: 362 -----SMASTFIGNSTSIQE-MFRRVSEQFTAMFRRKAFLHWY 398
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEKAYHEQL 184
N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+ + + +
Sbjct: 229 NSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKT 288
Query: 185 SVAEITNACFEPANQMVKCDPRH 253
+V ++ + N MV R+
Sbjct: 289 TVLDVMRRLLQTKNIMVSSYARN 311
Score = 33.9 bits (74), Expect = 0.098
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +1
Query: 256 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 384
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV 360
>05_05_0013 - 21509307-21509493,21509762-21510123
Length = 182
Score = 34.3 bits (75), Expect = 0.074
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 184 KLFMVGL--LGRDDWRVRDQWEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDET 11
+LF+ GL GR DWR +W V T QV+ + I+ A S R + ++ D T
Sbjct: 121 RLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFIRQANASSRGDSKRKSIHDIT 180
>03_05_0957 + 29195549-29196706,29198590-29198868
Length = 478
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +3
Query: 138 RTRQSSLPRRPTMNSFPSPRSQT---HASSPPTRW*NATPVMQVH 263
R R +S R T++S P+P + ASSPP + NA V+++H
Sbjct: 6 RQRSASSSRLSTLSSSPAPHTAAAAASASSPPLSFPNADLVLRLH 50
>10_06_0084 -
10477880-10477897,10477940-10478002,10479523-10479575,
10479774-10480589,10480889-10480998,10481338-10482068
Length = 596
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 138 RTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMQVHGLLYAVPW 287
R + LP RP P PR + A+ PPT V +V +L PW
Sbjct: 3 RRSRHFLPPRPRRR--PRPRREAPAAEPPTPTYTRDVVRRVDAILRGHPW 50
>01_01_1149 -
9134390-9134600,9134732-9134790,9135650-9135724,
9135815-9135934,9136012-9136183,9136277-9136335,
9136516-9136572,9136900-9136998,9137088-9137114,
9137607-9137649,9137779-9138023
Length = 388
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 217 LEACVCDLGDGKLFMVGLLGRDDWRVRDQWEVDTGVRHQ 101
L+ C+C DG +GLL W V + ++ T +H+
Sbjct: 28 LKYCLCSTRDGMALTLGLLSVISWGVAEVPQIITNYKHK 66
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 65 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 193
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>02_05_0316 - 27825871-27826509
Length = 212
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 244 VAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDWR 143
V F LV A VC GD + + G+ GRD+ R
Sbjct: 97 VRFDELVASAPAAVCGGGDCAVCLSGICGRDEVR 130
>09_01_0005 -
193214-193228,193659-193776,193876-194072,194534-195493
Length = 429
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 160 REGLP*TAFRRRDHKRMLRARQP 228
REG P RR++ KRML RQP
Sbjct: 75 REGPPAPEARRKERKRMLMPRQP 97
>01_05_0110 +
18225431-18226992,18227158-18228132,18228343-18228437,
18228556-18228842
Length = 972
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 304 PWVRRHHGTAYSKPCTCMTGVAF--HHLVGGLE 212
PW +R HG ++ +TG+A HLVGGL+
Sbjct: 71 PWRQRRHGRTTAR--NAITGIALPGAHLVGGLD 101
>01_01_1078 +
8489872-8490168,8490280-8490462,8490667-8490908,
8490988-8491240
Length = 324
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 232 HLVGGLEACVCDLGDGKLFMVGLLGRDDWRVRDQWEV 122
HLVG L A + DLG ++F+ G DW W++
Sbjct: 83 HLVGDLVALIADLGRPQVFVAG----HDWGAVVAWQL 115
>12_02_0339 - 17721664-17722407,17722921-17723556
Length = 459
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 246 PVMQVHGLLYAVPW*RR 296
PV HGLLY VP+ RR
Sbjct: 170 PVFSAHGLLYTVPYIRR 186
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 316 PRSHPWVRRHHGTAYSKPCTCMTGVAFHHL 227
P PW+RR+ ++ P +C TG+ L
Sbjct: 450 PTIPPWLRRYQDPDHATPASCGTGLQIQDL 479
>02_02_0521 -
11156594-11156956,11157097-11157483,11158327-11158383,
11159671-11159970
Length = 368
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 131 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHASTWLAV 274
+V AP + + HE L TN+ + P +Q+ +P + L+V
Sbjct: 68 VVAGAPAVPPATSVHELLECPVCTNSMYPPIHQLGHWEPEELPSMLSV 115
>01_06_1818 -
40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 483 FGDAGGVGQHADGTLTFGQVASGHHGGWLVVDTDLETGWTPVDELDST 340
+ DAG V G L V +GH G ++ ++ G +E+DST
Sbjct: 255 YADAGDVAALLSGALNVPMVLTGHSLGRNKLEQIMKQGRMSKEEIDST 302
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 317 PSLPSKPSVLSNSSTGVQPVSRSVSTT 397
PSLPS+P+ L S++ QP +R V T
Sbjct: 257 PSLPSRPAGLGASTSLSQPSARPVQQT 283
>07_01_0085 + 663694-665022
Length = 442
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -3
Query: 513 RTCGQRRAQSFGDAGGVGQHADGTLTFGQVASGHHGGWLVVDTDLETGWTPVDELD 346
R CG R + + V +D G+H LV D GWTP +E D
Sbjct: 383 RICGFPRMEQWKKEIFVSSLSDMVDDIENFRDGYHDSDLVRDALRRHGWTPAEEDD 438
>06_02_0216 +
13157377-13157583,13159271-13159339,13160727-13160851,
13160959-13161190
Length = 210
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 516 GRTCGQRRAQSFGDAGGVGQHADGTLTFGQVASGHHGG 403
G +C Q A + G AGGV A+GT + A+ GG
Sbjct: 109 GSSCRQDHAMAGGLAGGVRYGANGTTWRAEAAADTIGG 146
>05_06_0230 + 26585439-26586608
Length = 389
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 101 LVPYPRI-HFPLVTYAPVISAEKAYHEQLSVAEITNAC 211
L+ P + HFP + Y PV+ K H Q+S+ T +C
Sbjct: 94 LLVLPNVTHFPDMVYPPVLGVVKRDH-QISIVAATLSC 130
>02_02_0423 - 10064902-10064918,10064919-10064991,10066187-10066546
Length = 149
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = -3
Query: 507 CGQRRAQSFGDAGGVGQHADGTLT-FGQVAS----GHHGGWLVVDTDLETG 370
CG G GVG L FG++A G+ GGW VDT L+ G
Sbjct: 11 CGAYLIDGGGGERGVGMSNYRVLCMFGELACVFSPGNDGGWRFVDTGLKYG 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,695,634
Number of Sequences: 37544
Number of extensions: 482552
Number of successful extensions: 1812
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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