Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0377
(593 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 180 1e-45
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 180 1e-45
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 180 1e-45
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 180 1e-45
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 2e-45
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 2e-45
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 178 2e-45
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 177 5e-45
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 177 5e-45
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 177 5e-45
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 3e-44
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 2e-43
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 170 8e-43
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 170 8e-43
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 3e-42
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 146 1e-35
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 82 4e-16
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 82 4e-16
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 79 2e-15
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 79 3e-15
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 75 4e-14
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 73 2e-13
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 65 5e-11
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 54 7e-08
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_18882| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.70
SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16) 30 1.2
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099) 30 1.6
SB_43329| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 29 2.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_24732| Best HMM Match : Notch (HMM E-Value=0.21) 29 3.7
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 29 3.7
SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_52352| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_32671| Best HMM Match : SerH (HMM E-Value=0.4) 28 4.9
SB_25453| Best HMM Match : Hox9_act (HMM E-Value=0.54) 28 4.9
SB_3480| Best HMM Match : Cytochrom_NNT (HMM E-Value=4) 28 4.9
SB_410| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_37661| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_2653| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 27 8.6
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 180 bits (437), Expect = 1e-45
Identities = 85/92 (92%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 226 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 286 LSVAEITNACFEPANQMVKCDPRHGK-YMACC 316
Score = 178 bits (434), Expect = 2e-45
Identities = 84/92 (91%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 659 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 718
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 719 LTVAEITNACFEPANQMVKCDPRHGK-YMACC 749
Score = 173 bits (420), Expect = 1e-43
Identities = 82/103 (79%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 366
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT +AE KRAFVHWY
Sbjct: 367 DLAKVQRAVCMLSNTTAVAE-AWARLDHKFDLMYAKRAFVHWY 408
Score = 172 bits (418), Expect = 2e-43
Identities = 82/103 (79%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 740 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 799
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 800 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 841
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 180 bits (437), Expect = 1e-45
Identities = 85/92 (92%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 811 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 870
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 871 LSVAEITNACFEPANQMVKCDPRHGK-YMACC 901
Score = 178 bits (434), Expect = 2e-45
Identities = 84/92 (91%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 290 NLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 349
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 350 LSVAEITNACFEPANQMVKCDPRHGK-YMACC 380
Score = 172 bits (418), Expect = 2e-43
Identities = 82/103 (79%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 892 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 951
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 952 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 993
Score = 136 bits (330), Expect = 1e-32
Identities = 61/64 (95%), Positives = 61/64 (95%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 371 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 430
Query: 424 DLAK 435
DLAK
Sbjct: 431 DLAK 434
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 180 bits (437), Expect = 1e-45
Identities = 85/92 (92%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 24 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 83
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 84 LSVAEITNACFEPANQMVKCDPRHGK-YMACC 114
Score = 173 bits (421), Expect = 9e-44
Identities = 83/103 (80%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 105 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 164
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 165 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 206
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 180 bits (437), Expect = 1e-45
Identities = 85/92 (92%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 226 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 286 LSVAEITNACFEPANQMVKCDPRHGK-YMACC 316
Score = 169 bits (412), Expect = 1e-42
Identities = 80/103 (77%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+LYRGDVVPKDVN++IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLLYRGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 366
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 367 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 408
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 178 bits (434), Expect = 2e-45
Identities = 84/92 (91%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 163 NLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 222
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 223 LSVAEITNACFEPANQMVKCDPRHGK-YMACC 253
Score = 173 bits (421), Expect = 9e-44
Identities = 83/103 (80%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 244 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 303
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 304 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 345
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 178 bits (434), Expect = 2e-45
Identities = 84/92 (91%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 226 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 286 LTVAEITNACFEPANQMVKCDPRHGK-YMACC 316
Score = 172 bits (418), Expect = 2e-43
Identities = 82/103 (79%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 366
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 367 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 408
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 178 bits (434), Expect = 2e-45
Identities = 84/92 (91%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 151 NLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 210
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
LSVAEITNACFEPANQMVKCDPRH ++A C
Sbjct: 211 LSVAEITNACFEPANQMVKCDPRHGK-YMACC 241
Score = 173 bits (421), Expect = 9e-44
Identities = 83/103 (80%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 232 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 291
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 292 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 333
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 177 bits (431), Expect = 5e-45
Identities = 83/92 (90%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 24 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 83
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VA+ITNACFEPANQMVKCDPRH ++A C
Sbjct: 84 LTVADITNACFEPANQMVKCDPRHGK-YMACC 114
Score = 165 bits (400), Expect = 3e-41
Identities = 78/103 (75%), Positives = 81/103 (78%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ PT VPGG
Sbjct: 105 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQQPTAVPGG 164
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QR+VCMLSNTT IA+ KRAFVHWY
Sbjct: 165 DLAKVQRSVCMLSNTTAIAD-AWARLNHKFDLMYAKRAFVHWY 206
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 177 bits (431), Expect = 5e-45
Identities = 83/92 (90%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 225 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 284
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VA+ITNACFEPANQMVKCDPRH ++A C
Sbjct: 285 LTVADITNACFEPANQMVKCDPRHGK-YMACC 315
Score = 105 bits (253), Expect = 2e-23
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 405
P KYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI ++ P
Sbjct: 306 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIRHKAP 359
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 177 bits (431), Expect = 5e-45
Identities = 83/92 (90%), Positives = 87/92 (94%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 151 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 210
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VAEITN+CFEPANQMVKCDPRH ++A C
Sbjct: 211 LTVAEITNSCFEPANQMVKCDPRHGK-YMACC 241
Score = 125 bits (301), Expect = 3e-29
Identities = 66/103 (64%), Positives = 68/103 (66%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+LYRGDVVPKDVNAAIATI+ KRT QF DWCPTGFKVGIN QPPTVVPGG
Sbjct: 232 PRHGKYMACCLLYRGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPPTVVPGG 291
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK IAE KRAFVHWY
Sbjct: 292 DLAK------------PIAE-AWARLDHKFDLMYAKRAFVHWY 321
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3
Query: 501 DHKFDLMYAKACFCALVPSGEGFWRKEKFSE 593
DHKFDLMYAK F GEG + +FSE
Sbjct: 305 DHKFDLMYAKRAFVHWY-VGEGM-EEGEFSE 333
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 175 bits (425), Expect = 3e-44
Identities = 82/92 (89%), Positives = 86/92 (93%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 211 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 270
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VAEIT +CFEPANQMVKCDPRH ++A C
Sbjct: 271 LTVAEITTSCFEPANQMVKCDPRHGK-YMACC 301
Score = 170 bits (414), Expect = 6e-43
Identities = 81/103 (78%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+L+RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 292 PRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 351
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 352 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 393
Score = 170 bits (414), Expect = 6e-43
Identities = 81/103 (78%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+L+RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 723 PRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 782
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 783 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 824
Score = 136 bits (329), Expect = 1e-32
Identities = 62/92 (67%), Positives = 76/92 (82%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLI ++ ++LR+ LNVDL EFQTNLVPYPRIHFP+ TYAP+ISAEKAYHE
Sbjct: 644 NLNRLIDCVLHHCLSTLRW--ILNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYHEM 701
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
++V+++TNACFEPANQMVKCDPRH ++A C
Sbjct: 702 MTVSDLTNACFEPANQMVKCDPRHGK-YMACC 732
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 172 bits (418), Expect = 2e-43
Identities = 82/103 (79%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 272 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 332 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 373
Score = 171 bits (416), Expect = 4e-43
Identities = 77/92 (83%), Positives = 86/92 (93%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFP+ TYAP+ISAEKAYHE
Sbjct: 191 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYHEM 250
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
++V+++TNACFEPANQMVKCDPRH ++A C
Sbjct: 251 MTVSDLTNACFEPANQMVKCDPRHGK-YMACC 281
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 170 bits (413), Expect = 8e-43
Identities = 77/92 (83%), Positives = 86/92 (93%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLI Q+VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFP+ +YAPV+SAEKAYHEQ
Sbjct: 597 NLNRLISQLVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQ 656
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VA+ITN+CFEPANQMVKCDPRH ++A C
Sbjct: 657 LTVADITNSCFEPANQMVKCDPRHGK-YMACC 687
Score = 169 bits (412), Expect = 1e-42
Identities = 80/103 (77%), Positives = 83/103 (80%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KYMACC+LYRGDVVPKDVN+AIATIKTK+TIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 678 PRHGKYMACCLLYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPPTVVPGG 737
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
DLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 738 DLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 779
Score = 159 bits (385), Expect = 2e-39
Identities = 75/77 (97%), Positives = 76/77 (98%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 1030 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 1089
Query: 182 LSVAEITNACFEPANQM 232
L+VAEITNACFEPANQM
Sbjct: 1090 LTVAEITNACFEPANQM 1106
Score = 136 bits (328), Expect = 2e-32
Identities = 66/83 (79%), Positives = 66/83 (79%)
Frame = +1
Query: 304 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKGQRAVCMLSNTTGIAE 483
DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK QRAVCMLSNTT IAE
Sbjct: 1107 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 1166
Query: 484 XXXXXXXXXXXXXXXKRAFVHWY 552
KRAFVHWY
Sbjct: 1167 -AWARLDHKFDLMYAKRAFVHWY 1188
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 170 bits (413), Expect = 8e-43
Identities = 79/92 (85%), Positives = 85/92 (92%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSSIT+SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS EKAYHEQ
Sbjct: 1137 NLNRLIGQIVSSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQ 1196
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VA+ITN CF+P NQMVKCDPRH ++A C
Sbjct: 1197 LTVAQITNMCFDPNNQMVKCDPRHGK-YMACC 1227
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDV 294
P KYMACCMLYRGDV
Sbjct: 1218 PRHGKYMACCMLYRGDV 1234
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 168 bits (408), Expect = 3e-42
Identities = 77/92 (83%), Positives = 85/92 (92%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSS+TASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVI A+KAYHE
Sbjct: 357 NLNRLIGQIVSSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYHEN 416
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
+SVAEIT+ACFEP+NQMVKCDPR+ ++A C
Sbjct: 417 MSVAEITSACFEPSNQMVKCDPRYGK-YMACC 447
Score = 145 bits (352), Expect = 2e-35
Identities = 78/120 (65%), Positives = 80/120 (66%), Gaps = 21/120 (17%)
Frame = +1
Query: 256 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK------------------ 381
KYMACC+LYRGDVVPKDVN+AIA IK KRTIQFVDWCPTGFK
Sbjct: 442 KYMACCLLYRGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFKCHPNISDKQKKSTKTFYS 501
Query: 382 ---VGINYQPPTVVPGGDLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
VGINYQPPTVVPGGDLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 502 GTQVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 560
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 146 bits (354), Expect = 1e-35
Identities = 74/105 (70%), Positives = 78/105 (74%)
Frame = +1
Query: 238 MRPPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 417
+R + ++A C GDVV KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 290 IRVTASTWLAVCYS-EGDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 348
Query: 418 GGDLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
GGDLAK QRAVCMLSNTT IAE KRAFVHWY
Sbjct: 349 GGDLAKVQRAVCMLSNTTAIAE-AWARLDHKFDLMYAKRAFVHWY 392
Score = 142 bits (345), Expect = 1e-34
Identities = 71/92 (77%), Positives = 76/92 (82%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
NLNRLIGQIVSS+TASLRFDG+LNVDL EFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 216 NLNRLIGQIVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 275
Query: 182 LSVAEITNACFEPANQMVKCDPRHASTWLAVC 277
L+VAEITN ++ ASTWLAVC
Sbjct: 276 LTVAEITNGILSNVIRVT------ASTWLAVC 301
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S +
Sbjct: 224 DLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRA 283
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T F+ N M CDPRH
Sbjct: 284 LTVPELTQQMFDAKNMMAACDPRH 307
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/117 (21%), Positives = 49/117 (41%)
Frame = +1
Query: 202 KRMLRARQPDGEMRPPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 381
++M A+ P +Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 291 QQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 382 VGINYQPPTVVPGGDLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
+ PP + + + + N+T I E ++AF+HWY
Sbjct: 351 TAVCDIPPRGL--------KMSATFIGNSTAIQE-LFKRISEQFTAMFRRKAFLHWY 398
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S +
Sbjct: 224 DLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRA 283
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T F+ N M CDPRH
Sbjct: 284 LTVPELTQQMFDAKNMMAACDPRH 307
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/117 (21%), Positives = 49/117 (41%)
Frame = +1
Query: 202 KRMLRARQPDGEMRPPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 381
++M A+ P +Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 291 QQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 382 VGINYQPPTVVPGGDLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
+ PP + + + + N+T I E ++AF+HWY
Sbjct: 351 TAVCDIPPRGL--------KMSATFIGNSTAIQE-LFKRISEQFTAMFRRKAFLHWY 398
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN +I +S +T LRF G LN DL + N++PYPR+HF + +AP+ S E +
Sbjct: 129 DLNHIISNTMSGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRA 188
Query: 182 LSVAEITNACFEPANQMVKCDPR 250
L+VA++T A F+ N ++ C+P+
Sbjct: 189 LTVADLTQAIFDNKNLLIACNPK 211
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/103 (29%), Positives = 44/103 (42%)
Frame = +1
Query: 244 PPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 423
P KY+ +YRG + K+V +A + + + FVDW P KV + PP
Sbjct: 210 PKRGKYLTYAAMYRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPP-----H 264
Query: 424 DLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
D+ A C+ SNT + +RAF+HWY
Sbjct: 265 DMK--MSASCISSNTA--IQELFKRIRLHYKLMFRRRAFLHWY 303
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 115
NLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 101 NLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +2
Query: 2 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 181
+LN L+ +S +T LRF G LN DL + N+VP+PR+ F + +AP+ S +
Sbjct: 169 DLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRA 228
Query: 182 LSVAEITNACFEPANQMVKCDPRH 253
L+V E+T F+ N M CDP H
Sbjct: 229 LTVPELTQQMFDAKNMMAACDPLH 252
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/117 (20%), Positives = 49/117 (41%)
Frame = +1
Query: 202 KRMLRARQPDGEMRPPSCKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 381
++M A+ P +Y+ ++RG + K+++ + ++ K + FV+W P K
Sbjct: 236 QQMFDAKNMMAACDPLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVK 295
Query: 382 VGINYQPPTVVPGGDLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
+ PP + + + + N+T I E ++AF+HWY
Sbjct: 296 TAVCDIPPRGL--------KMSATFIGNSTAIQE-LFKRISEQFTAMFRRKAFLHWY 343
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = +1
Query: 382 VGINYQPPTVVPGGDLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXKRAFVHWY 552
VGINYQ PT VPGGDLAK QR+VCMLSNTT IA+ KRAFVHWY
Sbjct: 51 VGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIAD-AWARLNHKFDLMYAKRAFVHWY 106
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 64.9 bits (151), Expect = 5e-11
Identities = 25/83 (30%), Positives = 50/83 (60%)
Frame = +2
Query: 5 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQL 184
+N ++ ++ ++T+S RF+G+LNVDL E NLVP+P++H+ + + P+ +
Sbjct: 274 MNNIVANLILNMTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPR 333
Query: 185 SVAEITNACFEPANQMVKCDPRH 253
+ ++ F +Q++K DP+H
Sbjct: 334 RLDQMFTDAFSKDHQLIKADPKH 356
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 259 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 417
Y+AC ++ RG+V D+ I +K +++F+ W G+K G+ PP P
Sbjct: 359 YLACALILRGNVEVSDIRRNIERLKP--SLKFIHWNQEGWKTGLCSVPPVGQP 409
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 54.4 bits (125), Expect = 7e-08
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 101 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 253
+VP+PR+HF + +AP+ S ++ +SV E+T F+ N M CDPRH
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRH 51
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/61 (32%), Positives = 38/61 (62%)
Frame = +2
Query: 5 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQL 184
+N+L+ I+++ T +LR+ G +N DL +L+P PR+HF + Y P+ + +K + +
Sbjct: 264 VNQLVSTIMATSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQKPKNVMV 323
Query: 185 S 187
S
Sbjct: 324 S 324
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 144 RQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVM 254
R++ +P +P +N PSP S+T +S PP + TP++
Sbjct: 84 RRTRIPAKPALN-LPSPPSKTPSSVPPQAKVDETPLL 119
>SB_18882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 468 GVGQHADGTLTFGQVASGHHGGWLVVDTDLETGWTPVDELDSTLGFDGSDGRV-HILGY 295
GVG H DG L++ + + +H G L ++ D TG + E D F RV ILGY
Sbjct: 198 GVGIHVDGVLSYVRNITLYHDGLLSLNEDSRTG-NELRENDFRFDFIQKVFRVIDILGY 255
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 144 RQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVM 254
R++ +P +P +N PSP S+T +S PP + TP++
Sbjct: 84 RRTRIPAKPALN-LPSPPSKTPSSVPPQAKVDETPLL 119
>SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 405 GWLVVDTDLETGWTPVDELDSTLGFDGSD 319
GW VD D+E GW P L+ G G D
Sbjct: 38 GWCFVDVDVELGWVPASYLEPRDG-SGDD 65
>SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16)
Length = 675
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 259 YMACCMLYR-GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 435
Y++C R GDV+ D N I + +F+D C + G Y V+P GDL
Sbjct: 244 YISCLTFARNGDVITGDTNGTIYVWREGNIARFIDICEV-YVEGPVY-ALLVLPNGDLLS 301
Query: 436 G 438
G
Sbjct: 302 G 302
>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
Length = 2489
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 111 TPVSTSHWSRTRQSSLPRRPTMNSFP-SPRSQTHASSPPTRW*NATPVMQVH 263
+PV H SR + P RP P SP + H S P + PV ++H
Sbjct: 1805 SPVREMHSSRAVREMHPSRPVREMHPSSPVREMHPSRPVREMHPSKPVREMH 1856
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 96 LTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS-PRSQTHASSPPTRW*NATPVMQVH 263
+ + + PV H SR + P RP PS P + H SSP ++ V ++H
Sbjct: 1764 VAYVVRPVREMHPSRPVREMHPSRPVREMHPSKPVREMHPSSPVREMHSSRAVREMH 1820
>SB_43329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Frame = +3
Query: 78 TSPSSRLTWCL----------TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASS 218
TSP + +WC TPV T R++ S RR ++ F SPRS+ A S
Sbjct: 79 TSPPTIKSWCYKPQTVTRSSKTPVKTERLCRSKSESGIRRKDLSHFHSPRSEFTAPS 135
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 468 GVGQHADGTLTFGQVASGHHGGWLVVDTDLETG 370
GVG H DG L++ + + +H G L ++ D TG
Sbjct: 1563 GVGIHVDGVLSYVRNITLYHDGLLSLNEDSRTG 1595
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 144 RQSSLPRRPTMNSFPSPRSQTHASSPP 224
R++ +P +P++N PSP S+T +S PP
Sbjct: 544 RRTRIPAKPSLN-LPSPPSKTPSSVPP 569
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 144 RQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVM 254
R++ + +P +N PSP S+T +S PP + TPV+
Sbjct: 44 RRTRIQAKPALN-LPSPPSKTPSSVPPQAKVDETPVL 79
>SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 405 GWLVVDTDLETGWTPVDELDSTLGFDGSD 319
GW VD D E GW P L+ DGSD
Sbjct: 169 GWWFVDLDGELGWVPASYLEPR---DGSD 194
>SB_24732| Best HMM Match : Notch (HMM E-Value=0.21)
Length = 223
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 223 QPDGEMRPPSCKYMACCMLYRGDVVPKDVNAAIA 324
Q + + PP+C + C + RG V+P V+ A
Sbjct: 159 QQECDHNPPNCPFENCACIVRGVVLPASVSVCTA 192
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 352 FVDWCPTGFKVGINYQPPTVVPGGDLAKGQRAVCMLSNTTGIAEXXXXXXXXXXXXXXXK 531
FV+W P K + PP + + A L N+T I E +
Sbjct: 160 FVEWIPNNMKTAVCDVPPVGL--------KNAATFLYNSTAIQEAFRRFTEQFAAMFR-R 210
Query: 532 RAFVHWY 552
RAF+HWY
Sbjct: 211 RAFLHWY 217
>SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Frame = +2
Query: 128 PLVTYAPVISAEKAYHEQLSVAEITNACFEPAN---QMVKCDPRHASTWLAVCCTVVTSY 298
P T P K+ E + + +PA Q + P H S + T ++
Sbjct: 342 PQATGQPTQIISKSQSEHPRHNQPMHVTLKPAQGPAQFYQPSPPHPSLQGSAPPTPTNTF 401
Query: 299 PRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEAT 427
P+M P PS++S +S G+Q ++ S + P + P T
Sbjct: 402 PKM-----RPLTPSLMSPTSQGIQQAPQTPSFQASPKFNPPGT 439
>SB_52352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 217 LEACVCDLGDGKLFMVGLLG 158
L +CVC+ GDG LF+ LG
Sbjct: 611 LTSCVCECGDGYLFLGSRLG 630
>SB_32671| Best HMM Match : SerH (HMM E-Value=0.4)
Length = 406
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 241 RPPSCKYMACCMLYRGDVVPKDV 309
RPP+C + C RG+V+P +
Sbjct: 290 RPPNCYFEICACTIRGEVLPASI 312
>SB_25453| Best HMM Match : Hox9_act (HMM E-Value=0.54)
Length = 176
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/64 (28%), Positives = 23/64 (35%)
Frame = +3
Query: 144 RQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMQVHGLLYAVPW*RRTQGCERGHR 323
R ++ P M + A PP+R +ATP G W R GH
Sbjct: 17 RWTAAPELQIMVAMEQRLRAQQAQHPPSRRPDATPKSHPAGSAAVPAWYRWHNVLYEGHP 76
Query: 324 YHQN 335
YH N
Sbjct: 77 YHSN 80
>SB_3480| Best HMM Match : Cytochrom_NNT (HMM E-Value=4)
Length = 245
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 513 RTCGQRRAQSFGDAGGVGQHADGTLTFGQVASGHHGGW 400
R + A + G + A +LTFG ++ GHH W
Sbjct: 110 RPVQNKMAATVKKKGKASEQASPSLTFGFLSQGHHYNW 147
>SB_410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 306 CERGHRYHQNQAYYPIRRLVSNRFQGRYQLPA 401
C+ H HQ+Q +P+R LV + QG PA
Sbjct: 2 CQCCHSNHQDQENHPVRPLVPHWIQGINYQPA 33
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -1
Query: 584 LFLPPKTFTGGYQCTKARFGVHEVELVVKGEPKVSAMPVV--LDNMQTAR*PLAKSPPGT 411
LF+ FT ++ TK R HEV +V G V + V L+ R PL G
Sbjct: 78 LFIRDLLFTNEHRSTKIRLATHEVIDIVSGFASVLTLASVAGLERWFAVRWPLKHKIVGF 137
Query: 410 TVG 402
+G
Sbjct: 138 RLG 140
>SB_37661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 191 AEITNACFEPANQMVKCDPRHASTWLAV 274
A T+ CF+PA ++ RHAS LAV
Sbjct: 145 ARSTHDCFDPAGDPLESTCRHASLALAV 172
>SB_2653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1298
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 322 RWPRSHPWVRRHHGTAY-SKPCTCMT 248
R P S PW+ R H TA+ KP + T
Sbjct: 948 RIPLSFPWIERRHQTAFHGKPSSSST 973
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -3
Query: 489 QSFGDAGGVGQHADGTLTFGQVASGHHGGWLVVDTDLETGWTPVDELDSTLG 334
+ F D GGV + L F GW V+ D E GW P L+S G
Sbjct: 56 EEFPDEGGVKDPSARVLPFLP-------GWWFVNLDEEQGWVPAAYLESVDG 100
>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 129 HWSRTRQSSLPRRPTMNSFPSPRSQTHASS 218
H+S SS P PT + FPSPR ++ SS
Sbjct: 1149 HYSSLDLSS-PETPTSSDFPSPRRESPDSS 1177
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,381,740
Number of Sequences: 59808
Number of extensions: 499423
Number of successful extensions: 1720
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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