Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0376
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    26   0.27 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.6  

>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 383 PTGPVESAKKLIEHINKQALETPDRPEVKAFRPRRCQ 493
           P G      + + H N +    PD+ +   F P RCQ
Sbjct: 83  PVGTTVGIGQFLVHRNPKYFPNPDKFDPDNFLPERCQ 119


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 412 TDRAHQQASTGDPRPA 459
           + R+HQ A+   PRPA
Sbjct: 246 SSRSHQPATKSKPRPA 261


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 383 PTGPVESAKKLIEHINKQALETPDRPE 463
           PTGPV  A + +   ++Q     D PE
Sbjct: 95  PTGPVTLASRAVTFNHQQLELETDTPE 121


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 32  ITAFLSVPPQI 64
           ITAFLSV PQ+
Sbjct: 88  ITAFLSVLPQL 98


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 514 AGIHFLPLTTPGTKGF 467
           +G H+  LT  G KGF
Sbjct: 196 SGYHYNALTCEGCKGF 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,092
Number of Sequences: 336
Number of extensions: 2699
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)