Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0376
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   1.8  
AY062203-1|AAL58564.1|  149|Anopheles gambiae cytochrome P450 CY...    24   3.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.1  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 383  DPSSKRSCYAVTVEENCRQDQ 321
            DP+++R  + + VEE CR  Q
Sbjct: 973  DPTNERKVFNMLVEETCRTGQ 993


>AY062203-1|AAL58564.1|  149|Anopheles gambiae cytochrome P450
           CYP4C25 protein.
          Length = 149

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 422 HINKQALETPDRPEVKAFRPRRCQGQEVDSGPPF 523
           H N +    PD+     F P  C+G+   +  PF
Sbjct: 107 HRNPEVFPNPDKFNPDHFLPENCRGRNPYAXIPF 140


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 305  MLAKEVDPDDNFLPP 349
            M+A + +P DN+LPP
Sbjct: 1739 MIAAKFEPHDNWLPP 1753


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 448 PRPARGQSLSSPALSGARSGFRPP 519
           PRP   Q +  P + G     RPP
Sbjct: 246 PRPPSAQGMQRPPMMGQPPPIRPP 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,498
Number of Sequences: 2352
Number of extensions: 14087
Number of successful extensions: 65
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)