Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0375
         (562 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161...    30   1.1  
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881     28   4.4  
04_04_1418 + 33428527-33428895,33429206-33429280,33429697-334299...    27   7.7  
03_06_0065 - 31399791-31399874,31399956-31400165,31400407-314005...    27   7.7  

>03_05_1133 - 30614901-30615389,30615823-30615933,30616113-30616178,
            30616347-30616406,30616493-30616801,30616960-30617108,
            30617200-30617269,30617370-30617494,30617516-30617573,
            30618176-30618370,30618585-30618857,30618950-30619120,
            30619203-30619333,30619423-30619582,30619712-30619900,
            30620023-30620118,30620381-30620611,30620715-30620853,
            30620903-30621057,30621160-30621378
          Length = 1131

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +2

Query: 338  NTPYNIFGDRKVWRNIVQTKVLRKGHRPSERRTQHKEDHTF 460
            +T  NI  D    ++++QT ++R GH P + +T+H + + F
Sbjct: 1017 DTKGNIIKDGMNPKSLLQTLLMRAGHTPPKYKTKHLKTNEF 1057


>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
          Length = 697

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 296 SASLHAFRSAPSNTHDDHDHSVKSD 222
           S  LH   SAP    DD+D+SV SD
Sbjct: 464 SVHLHGATSAPRLAEDDNDNSVASD 488


>04_04_1418 +
           33428527-33428895,33429206-33429280,33429697-33429978,
           33430058-33430205,33430309-33430388,33431238-33431318,
           33431416-33431514
          Length = 377

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 388 DYVPPDLPVSKYIVWRIKRLHG*GVSLYLYLA 293
           DY PPD PVS+Y    + ++   GV    Y A
Sbjct: 214 DYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYA 245


>03_06_0065 -
           31399791-31399874,31399956-31400165,31400407-31400526,
           31401166-31401225,31401670-31401879,31402512-31402587,
           31403010-31403173,31403254-31403316,31403640-31403727,
           31403810-31404460,31405102-31405149,31405334-31405902
          Length = 780

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 370 GLEEHSPNKSAP*RSPTLRTKN 435
           G +E SP +S+P RSP LR+KN
Sbjct: 320 GSQERSP-RSSPLRSPVLRSKN 340


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,900,131
Number of Sequences: 37544
Number of extensions: 294811
Number of successful extensions: 541
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)