Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0373
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.2  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   3.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   3.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   3.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   5.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/22 (36%), Positives = 18/22 (81%)
 Frame = +2

Query: 407  NEEVEFLKQTVTELSRQIASLE 472
            NE++  +++++ +L+R+I SLE
Sbjct: 1099 NEQLRKIQESLRDLNRKIESLE 1120


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/22 (36%), Positives = 18/22 (81%)
 Frame = +2

Query: 407  NEEVEFLKQTVTELSRQIASLE 472
            NE++  +++++ +L+R+I SLE
Sbjct: 1099 NEQLRKIQESLRDLNRKIESLE 1120


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 276 CCITLCMNPRRPRADASA 223
           CC+  C + +RP+ + S+
Sbjct: 191 CCLRTCSSAKRPKFENSS 208


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 200 KAIQRVPAAEA-SARGRRGFMHKVMQQA 280
           ++I +V   EA  +RG R F HK +Q A
Sbjct: 86  ESIFKVEVHEALMSRGERRFSHKALQGA 113


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 200 KAIQRVPAAEA-SARGRRGFMHKVMQQA 280
           ++I +V   EA  +RG R F HK +Q A
Sbjct: 246 ESIFKVEVHEALMSRGERRFSHKALQGA 273


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 200 KAIQRVPAAEA-SARGRRGFMHKVMQQA 280
           ++I +V   EA  +RG R F HK +Q A
Sbjct: 246 ESIFKVEVHEALMSRGERRFSHKALQGA 273


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 78  LFRI*VDTLYVSFLHLHICFSTF 10
           +  I V T+  S + LH+CF+++
Sbjct: 45  IIAIYVLTILTSSVTLHVCFNSY 67


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 98  PPASLQHFARRKKPPGLGV 154
           PP    H+AR    P  GV
Sbjct: 166 PPVYTHHYARYHPYPNFGV 184


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 59  IRFMFPFCIFISVFPLF 9
           +  +F  CI+  V PLF
Sbjct: 125 VHLLFLLCIYYFVVPLF 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,279
Number of Sequences: 336
Number of extensions: 1596
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)