Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0373
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   0.75 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   4.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   5.3  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   9.2  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 26.2 bits (55), Expect = 0.75
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 15  WKNRYEDAERKHKAYLLKSEKAKREHDDLQRRYNIL 122
           W+N  ++   K +A  L+ +KAK E D  QR Y  L
Sbjct: 123 WENTVQNIRDKKEAERLRRDKAKVEED--QRHYREL 156


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 37  QKGNIKRIYSNPKKQNVSTMT 99
           + GN K +  +PK QN+S+ T
Sbjct: 262 RNGNSKNLTGSPKSQNLSSPT 282


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 406  QRGSGVPEADRHGAEQADRVAGDRPQ 483
            QR SGVPE   H   +  R A  R Q
Sbjct: 942  QRCSGVPETAEHAMFECPRFAEVRQQ 967


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +2

Query: 206 IQRVPAAEASARGRRGFMHKVMQQAGEW 289
           IQR         GR+GF H +  +   W
Sbjct: 73  IQRTLDGRLQVAGRKGFPHVIYARIWRW 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,075
Number of Sequences: 2352
Number of extensions: 7035
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)