Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0373
         (566 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC118635-1|AAI18636.1|  255|Homo sapiens H1 histone family, memb...    30   6.5  
BC115383-1|AAI15384.1|  684|Homo sapiens taxilin beta protein.         29   8.6  
AL832322-1|CAD38617.1|  505|Homo sapiens hypothetical protein pr...    29   8.6  
AL831988-1|CAD91140.1|  718|Homo sapiens hypothetical protein pr...    29   8.6  

>BC118635-1|AAI18636.1|  255|Homo sapiens H1 histone family, member
           N, testis-specific protein.
          Length = 255

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 200 KAIQRVPAAEASARGRRGFMHKVMQQAGEWYKQNKQLKRRS 322
           +A  R PAA  S+R RR  + K  ++A E ++QN + K ++
Sbjct: 142 RAPWRTPAAPRSSRRRRQPLRKAARKAREVWRQNARAKAKA 182


>BC115383-1|AAI15384.1|  684|Homo sapiens taxilin beta protein.
          Length = 684

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 25/89 (28%), Positives = 37/89 (41%)
 Frame = +2

Query: 227 EASARGRRGFMHKVMQQAGEWYKQNKQLKRRSTVLMQALPVPPVXXXXXXXXXXXXXXXX 406
           EA  R +R   + ++ QA EW  Q K LK + TVL   L +                   
Sbjct: 323 EAEERHKREKEY-LLNQAAEWKLQAKMLKEQETVLQAQLTL----YSGRFEEFQSTLTKS 377

Query: 407 NEEVEFLKQTVTELSRQIASLETDLNTAK 493
           NE     KQ + + ++++  LE D  T K
Sbjct: 378 NEVFATFKQEMDKTTKKMKKLEKDTATWK 406


>AL832322-1|CAD38617.1|  505|Homo sapiens hypothetical protein
           protein.
          Length = 505

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 25/89 (28%), Positives = 37/89 (41%)
 Frame = +2

Query: 227 EASARGRRGFMHKVMQQAGEWYKQNKQLKRRSTVLMQALPVPPVXXXXXXXXXXXXXXXX 406
           EA  R +R   + ++ QA EW  Q K LK + TVL   L +                   
Sbjct: 144 EAEERHKREKEY-LLNQAAEWKLQAKMLKEQETVLQAQLTL----YSGRFEEFQSTLTKS 198

Query: 407 NEEVEFLKQTVTELSRQIASLETDLNTAK 493
           NE     KQ + + ++++  LE D  T K
Sbjct: 199 NEVFATFKQEMDKTTKKMKKLEKDTATWK 227


>AL831988-1|CAD91140.1|  718|Homo sapiens hypothetical protein
           protein.
          Length = 718

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 25/89 (28%), Positives = 37/89 (41%)
 Frame = +2

Query: 227 EASARGRRGFMHKVMQQAGEWYKQNKQLKRRSTVLMQALPVPPVXXXXXXXXXXXXXXXX 406
           EA  R +R   + ++ QA EW  Q K LK + TVL   L +                   
Sbjct: 357 EAEERHKREKEY-LLNQAAEWKLQAKMLKEQETVLQAQLTL----YSGRFEEFQSTLTKS 411

Query: 407 NEEVEFLKQTVTELSRQIASLETDLNTAK 493
           NE     KQ + + ++++  LE D  T K
Sbjct: 412 NEVFATFKQEMDKTTKKMKKLEKDTATWK 440


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,682,751
Number of Sequences: 237096
Number of extensions: 1009992
Number of successful extensions: 2978
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2966
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)