Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0373
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 31 0.58
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 31 0.58
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 29 3.1
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 28 5.4
Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 5.4
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 27 9.4
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 31.1 bits (67), Expect = 0.58
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 30 EDAERKHKAYLLKSEKAKREHDDLQRRYN 116
ED E H++YLLK+E+ + E+D + + N
Sbjct: 1458 EDVEEFHRSYLLKNEECEVENDRISEKKN 1486
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 31.1 bits (67), Expect = 0.58
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 30 EDAERKHKAYLLKSEKAKREHDDLQRRYN 116
ED E H++YLLK+E+ + E+D + + N
Sbjct: 1458 EDVEEFHRSYLLKNEECEVENDRISEKKN 1486
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 9 EKWKNRYEDAERKHKAYLLKSE---KAKREHDDLQRR 110
E+WK R E+ RK K YL+ +E K+ +DD + R
Sbjct: 155 EEWKRRQEEETRKSKKYLIVNEFLPKSNSWYDDKKMR 191
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 15 WKNRYEDAERKHKAYLLKSEKAKREHDDLQRR 110
+K+ YE+A+ KH + A+RE ++L+R+
Sbjct: 163 FKSEYEEAQEKHGSMYKDGRAAQREMEELRRQ 194
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 33 DAERKHKAYLLKSEKAKREHDDLQRRYNILHEERNHL 143
D ER+ K ++ E+ KRE + R + +LH E L
Sbjct: 203 DRERRQKLASMRDERLKRERVEKARAHALLHPEEIEL 239
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 233 SARGRRGFMHKVMQQAGEWYKQN 301
S R RR F H VM+Q WY +N
Sbjct: 135 SNRFRRQFFHSVMRQEIAWYDKN 157
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 233 SARGRRGFMHKVMQQAGEWYKQN 301
S R RR F H VM+Q WY +N
Sbjct: 135 SNRFRRQFFHSVMRQEIAWYDKN 157
>Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical
protein C07G2.2c protein.
Length = 509
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 39 ERKHKAYLLKSEKAKREHDDLQRRYNILHEERNHL 143
ER A + ++ K EHDD+ R + E+N L
Sbjct: 399 ERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQL 433
>Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical
protein C07G2.2b protein.
Length = 460
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 39 ERKHKAYLLKSEKAKREHDDLQRRYNILHEERNHL 143
ER A + ++ K EHDD+ R + E+N L
Sbjct: 350 ERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQL 384
>Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical
protein C07G2.2a protein.
Length = 457
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 39 ERKHKAYLLKSEKAKREHDDLQRRYNILHEERNHL 143
ER A + ++ K EHDD+ R + E+N L
Sbjct: 350 ERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQL 384
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 6 VEKWKNRYEDAERKHKAYLLKSEKAKREHDDLQRRYNI---LHEERNHLD 146
VEK + + + R+ +A EK KRE ++ Q++ N+ +ER H++
Sbjct: 345 VEKERREHIERHRQAEARAKALEKEKRELEEKQKKENLERATQKEREHIE 394
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical
protein R09A8.1 protein.
Length = 1095
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 64 SRYALCFLSASSYLFFH 14
S YA+ F S+SS++FFH
Sbjct: 644 SSYAVAFYSSSSHMFFH 660
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,816,507
Number of Sequences: 27780
Number of extensions: 150572
Number of successful extensions: 678
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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