Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0371
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 157  FMNNCIKGTFPTKPSLN 207
            F N C  G+FP   SLN
Sbjct: 972  FSNRCCGGSFPLLRSLN 988


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 165 VHERPSRIFANLPMKQSRLIRL 100
           ++ + S IF NLP  +  LIRL
Sbjct: 123 INVQQSGIFINLPFLEHNLIRL 144


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 159 HEQLHQGNVSHK 194
           H+Q HQ N+SH+
Sbjct: 314 HQQHHQQNMSHE 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,295
Number of Sequences: 336
Number of extensions: 3419
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)