Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0371
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450 pr...    23   7.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.8  

>AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450
           protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = -1

Query: 538 FAITP--AGERGCAARRLSWVT 479
           FA+ P  AG R C   R +W++
Sbjct: 127 FALLPFSAGSRNCVGLRYAWIS 148


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 504  AHPLSPAGVIAKRPAPIA 557
            A P SPAGV+  +  P+A
Sbjct: 1338 AAPSSPAGVLVAKVPPVA 1355


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 117  IVSSEDLQKFERVFHEQLHQGNV 185
            +VS ED Q+F+R   + L  GN+
Sbjct: 989  LVSLEDHQQFQRPEQQTLKAGNL 1011


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,517
Number of Sequences: 2352
Number of extensions: 14639
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)