Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0371
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071264-1|AAL48886.1|   98|Drosophila melanogaster RE29957p pro...    63   3e-10
AE013599-87|AAM68368.2|   92|Drosophila melanogaster CG17510-PB,...    63   3e-10
AE013599-86|AAM68367.1|   98|Drosophila melanogaster CG17510-PA,...    63   3e-10
AY089246-1|AAL89984.1|  694|Drosophila melanogaster AT03323p pro...    30   2.7  
AF255662-1|AAF91348.1| 1215|Drosophila melanogaster benign gonia...    30   2.7  
AE013599-3702|AAF47077.2| 1215|Drosophila melanogaster CG30170-P...    30   2.7  
BT022973-1|AAY55389.1|   66|Drosophila melanogaster IP04214p pro...    29   6.3  
AE014296-2050|AAF49998.1|   66|Drosophila melanogaster CG12521-P...    29   6.3  

>AY071264-1|AAL48886.1|   98|Drosophila melanogaster RE29957p
           protein.
          Length = 98

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 24/43 (55%), Positives = 35/43 (81%)
 Frame = +2

Query: 260 LLLKELFNSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLE 388
           ++L+EL  +HP+G+RDY++YLA GNARIKEY   L Y ++FL+
Sbjct: 1   MILEELARTHPDGRRDYIYYLAFGNARIKEYTSGLKYCRAFLD 43


>AE013599-87|AAM68368.2|   92|Drosophila melanogaster CG17510-PB,
           isoform B protein.
          Length = 92

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 24/43 (55%), Positives = 35/43 (81%)
 Frame = +2

Query: 260 LLLKELFNSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLE 388
           ++L+EL  +HP+G+RDY++YLA GNARIKEY   L Y ++FL+
Sbjct: 1   MILEELARTHPDGRRDYIYYLAFGNARIKEYTSGLKYCRAFLD 43


>AE013599-86|AAM68367.1|   98|Drosophila melanogaster CG17510-PA,
           isoform A protein.
          Length = 98

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 24/43 (55%), Positives = 35/43 (81%)
 Frame = +2

Query: 260 LLLKELFNSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLE 388
           ++L+EL  +HP+G+RDY++YLA GNARIKEY   L Y ++FL+
Sbjct: 1   MILEELARTHPDGRRDYIYYLAFGNARIKEYTSGLKYCRAFLD 43


>AY089246-1|AAL89984.1|  694|Drosophila melanogaster AT03323p
           protein.
          Length = 694

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 285 ELNNSLRSKIPFVYPLDTCCALNTMRIQTGLCG 187
           ++  SL  K+PF Y +DT C LN +   T   G
Sbjct: 46  DIIESLCLKVPFKYQIDTACRLNNVYDTTSCSG 78


>AF255662-1|AAF91348.1| 1215|Drosophila melanogaster benign gonial
           cell neoplasm proteinprotein.
          Length = 1215

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 285 ELNNSLRSKIPFVYPLDTCCALNTMRIQTGLCG 187
           ++  SL  K+PF Y +DT C LN +   T   G
Sbjct: 567 DIIESLCLKVPFKYQIDTACRLNNVYDTTSCSG 599


>AE013599-3702|AAF47077.2| 1215|Drosophila melanogaster CG30170-PA
           protein.
          Length = 1215

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 285 ELNNSLRSKIPFVYPLDTCCALNTMRIQTGLCG 187
           ++  SL  K+PF Y +DT C LN +   T   G
Sbjct: 567 DIIESLCLKVPFKYQIDTACRLNNVYDTTSCSG 599


>BT022973-1|AAY55389.1|   66|Drosophila melanogaster IP04214p
           protein.
          Length = 66

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 87  PATMEDVLDEIVSSEDLQKFERVFHEQLHQGNVSHKA 197
           P T+++++DE+ +  + Q    + HE +  G  SHK+
Sbjct: 23  PLTLDEIVDELTAVINSQTELAIAHENIGDGKHSHKS 59


>AE014296-2050|AAF49998.1|   66|Drosophila melanogaster CG12521-PA
           protein.
          Length = 66

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 87  PATMEDVLDEIVSSEDLQKFERVFHEQLHQGNVSHKA 197
           P T+++++DE+ +  + Q    + HE +  G  SHK+
Sbjct: 23  PLTLDEIVDELTAVINSQTELAIAHENIGDGKHSHKS 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,337,225
Number of Sequences: 53049
Number of extensions: 606433
Number of successful extensions: 1420
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)