Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0371
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39853-4|AAK39224.1|  138|Caenorhabditis elegans S. cerevisiae f...    42   3e-04
U39853-3|AAT92078.1|  151|Caenorhabditis elegans S. cerevisiae f...    42   3e-04
U39999-11|AAA81109.1|  143|Caenorhabditis elegans S. cerevisiae ...    35   0.038

>U39853-4|AAK39224.1|  138|Caenorhabditis elegans S. cerevisiae
           fis1-related protein2, isoform a protein.
          Length = 138

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +2

Query: 251 KGILLLKELFNSHPE--GKRDYLFYLAIGNARIKEYNKALHYVKSFLEGGPGTQFA 412
           +GI+ L++L     +   KR+Y++YLA+ +ARIK+Y+ AL Y+   L+     Q A
Sbjct: 42  EGIVCLEKLLRDDEDRTSKRNYVYYLAVAHARIKQYDLALGYIDVLLDAEGDNQQA 97


>U39853-3|AAT92078.1|  151|Caenorhabditis elegans S. cerevisiae
           fis1-related protein2, isoform b protein.
          Length = 151

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +2

Query: 251 KGILLLKELFNSHPE--GKRDYLFYLAIGNARIKEYNKALHYVKSFLEGGPGTQFA 412
           +GI+ L++L     +   KR+Y++YLA+ +ARIK+Y+ AL Y+   L+     Q A
Sbjct: 55  EGIVCLEKLLRDDEDRTSKRNYVYYLAVAHARIKQYDLALGYIDVLLDAEGDNQQA 110


>U39999-11|AAA81109.1|  143|Caenorhabditis elegans S. cerevisiae
           fis1-related protein1 protein.
          Length = 143

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
 Frame = +2

Query: 251 KGILLLKELFN--SHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEGGPGTQFA 412
           +GI +L+++ +  +H E  R  + YLA+ +AR+K Y+K+++ + + L   P    A
Sbjct: 47  EGIEILEDVVSDTAHSEDSRVCVHYLALAHARLKNYDKSINLLNALLRTEPSNMQA 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,625,153
Number of Sequences: 27780
Number of extensions: 314792
Number of successful extensions: 793
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)