Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0370
(621 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 158 3e-39
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 158 3e-39
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 158 4e-39
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 157 5e-39
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 156 1e-38
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 153 1e-37
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 152 2e-37
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 150 8e-37
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 140 6e-34
12_02_1282 + 27528159-27529148,27529549-27529614 81 7e-16
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 76 2e-14
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 69 2e-12
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 66 2e-11
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 60 2e-09
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 52 4e-07
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 50 1e-06
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 50 1e-06
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 46 2e-05
03_02_0519 + 9066918-9068261 30 1.7
11_06_0126 - 20378611-20379719,20380081-20381239 29 3.0
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.0
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 29 3.0
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 29 3.9
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 29 3.9
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 28 6.9
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 28 6.9
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 27 9.1
09_02_0456 - 9525067-9525422,9525679-9528226 27 9.1
03_02_0146 + 5916692-5917931,5918198-5918261,5918836-5919057,591... 27 9.1
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 158 bits (384), Expect = 3e-39
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 292 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 351
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDESGPSIVHRKCF
Sbjct: 352 QQMWISKGEYDESGPSIVHRKCF 374
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 262 QPSLIGMEAPGIHETTYNSIMKCDVDIRKDLY 293
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 158 bits (384), Expect = 3e-39
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDESGP+IVHRKCF
Sbjct: 355 QQMWISKDEYDESGPAIVHRKCF 377
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PS +GM++ GIHETTYNSIMKCDVDIRKDLY
Sbjct: 265 QPSMIGMESAGIHETTYNSIMKCDVDIRKDLY 296
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 158 bits (383), Expect = 4e-39
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDESGP+IVHRKCF
Sbjct: 355 QQMWISKDEYDESGPAIVHRKCF 377
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 265 QPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 157 bits (382), Expect = 5e-39
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 265 QPSFIGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 156 bits (379), Expect = 1e-38
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 298 LYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 357
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDESGP+IVHRKCF
Sbjct: 358 QQMWISKAEYDESGPAIVHRKCF 380
Score = 64.1 bits (149), Expect = 9e-11
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 268 QPSLVGMEAAGIHETTYNSIMKCDVDIRKDLY 299
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 153 bits (371), Expect = 1e-37
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 355 QQMWISRAEYEESGPAIVHRKCF 377
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 265 QPSLIGMEAPGIHETTYNSIMKCDVDIRKDLY 296
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 152 bits (368), Expect = 2e-37
Identities = 69/83 (83%), Positives = 76/83 (91%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGG+TM+PGIADRM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTF 353
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDESGP IVH KCF
Sbjct: 354 QQMWISKGEYDESGPGIVHMKCF 376
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PS +GM++ GIHE TYNSIMKCDVDIRKDLY
Sbjct: 264 QPSLVGMESPGIHEATYNSIMKCDVDIRKDLY 295
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 150 bits (364), Expect = 8e-37
Identities = 68/83 (81%), Positives = 74/83 (89%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGG+TM+PGI DRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 294 LYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTF 353
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDESGP IVH KCF
Sbjct: 354 QQMWISKAEYDESGPGIVHMKCF 376
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PSF+GM+A GIHE TYNSIMKCDVDIRKDLY
Sbjct: 264 QPSFIGMEAPGIHEATYNSIMKCDVDIRKDLY 295
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 140 bits (340), Expect = 6e-34
Identities = 71/97 (73%), Positives = 78/97 (80%), Gaps = 14/97 (14%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 Q--------------QMWISKQEYDESGPSIVHRKCF 271
Q QMWISK EYDESGP+IVHRKCF
Sbjct: 355 QQVNLTPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 265 QPSFIGMEAPGIHETTYNSIMKCDVDIRKDLY 296
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 81.0 bits (191), Expect = 7e-16
Identities = 48/83 (57%), Positives = 52/83 (62%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEITALAPS+MKIK
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK------------------------ 330
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
MWI+K EYDESGPSIVHRKCF
Sbjct: 331 --MWIAKAEYDESGPSIVHRKCF 351
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -2
Query: 608 KPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 513
+PSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 265 QPSFVGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSIL 358
L+ +T+L GGT G DR Q+E L+ S + ++ PPE +YS W+GG+IL
Sbjct: 311 LLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAIL 369
Query: 357 ASLSTFQQMWISKQEYDESGPSIVHRKCF 271
A + Q ++K +YDE+GPSIVH+KCF
Sbjct: 370 AKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L +L+GG+T++P +R++KE+ L P ++KIIA + W GGS+LA F
Sbjct: 346 LFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDF 405
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
+ M I+K EY+E G R+ F
Sbjct: 406 ESMCITKSEYEEMGSMRCRRRFF 428
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 349
L+ +LSGG++ + +R++KE+ + ++K++A ER++SVWIGGSILASL
Sbjct: 398 LLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASL 457
Query: 348 STFQQMWISKQE 313
+FQQMW SK +
Sbjct: 458 GSFQQMWFSKAD 469
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 590 MKACGIHETTYNSIMKCDVDIRKDLYAT 507
M G+ +S+ +CDVDIRK+L ++
Sbjct: 374 MSVRGLPRMVIDSVNRCDVDIRKELLSS 401
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 7/81 (8%)
Frame = -1
Query: 504 VLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQM 331
VLSGG++ PG+++R++KE+ L P+ + I++I PP S W G +++++STF +
Sbjct: 402 VLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEA 461
Query: 330 W-ISKQEYDE----SGPSIVH 283
W I K+++ + +GPS V+
Sbjct: 462 WCIKKKQFRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERK 388
L ++ VLSGG+TM+ R+Q+++ + + + ++ +++ P ++
Sbjct: 370 LYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQR 429
Query: 387 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 289
Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 430 YAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAP--------------STMKIKIIAPPERKYS 382
L ++ VLSGG+TM+ R+Q +I + +++ ++A P + Y+
Sbjct: 339 LYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYA 398
Query: 381 VWIGGSILASLSTFQQMWISKQEYDESGPSI 289
W GGS+ AS F + +K+EY+E G SI
Sbjct: 399 AWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 11/68 (16%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWI 373
L +H VLSGG+TMYPG+ R++KE+ L + ++++I PP RK+ V++
Sbjct: 323 LYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYL 382
Query: 372 GGSILASL 349
GG++LA +
Sbjct: 383 GGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + +++GG ++ PG+ R++ I P +K++ + W G + A+ S F
Sbjct: 622 LCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKF 681
Query: 339 QQMWISKQEYDESGPSIVHRK 277
+ S +Y E G ++ HRK
Sbjct: 682 GRHTFSLADYREHGENLFHRK 702
>03_02_0519 + 9066918-9068261
Length = 447
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 201 NGDYKPELSSRPRAAGGSTRGAF--RSTSCVQWRGQ 302
NG Y P L+ A+G S+ GA ST+C +WRG+
Sbjct: 84 NGSYAPPLTPAFNASGSSSYGAVPCPSTAC-EWRGR 118
>11_06_0126 - 20378611-20379719,20380081-20381239
Length = 755
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 367 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDSRVHGG 489
++DP G+L W+ +D + CRW G +C L V ++GG
Sbjct: 48 TSDPLGLLTSWKEDDHDC-CRWRGVTCSNLTGHVLRLHLNGG 88
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 367 STDPYGVLPLWRSNDLNLHCRW-GESC 444
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 236 AGCWRQ-HARCV*KHFLCTMEGPDSSYSCFEIHICWKVEREARIDPPIHT 382
A C RQ HA+C+ LC EG ++ C + +R+ PIHT
Sbjct: 1110 AQCERQYHAKCIYGKLLCNEEGGPCAWFCGRRCQQIYMNLRSRVGIPIHT 1159
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 483 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 352
MYP D +K+ L K APPER+++ S+L S
Sbjct: 255 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHNSLPRPSVLYS 298
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 555 LHHEVRRGHP*GLVRHTVLSGGTT--MYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 382
++ E+ HP ++R + +T MYP D +K+ L K APPER+++
Sbjct: 325 IYREILEYHP-KMLREFLEGTESTGFMYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 383
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 383 PYGSVDRSSPPSLPSNKCGS 324
P+ V SSPP+LP KCG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 225 SSRPRAAGGSTRGAFRSTSCVQWRGQTRRT 314
S+R R+ GG G+ R SC QWR + R+
Sbjct: 413 SARRRSGGG---GSVRKRSCAQWRSGSARS 439
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 334 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWG 435
+L+ E S P +LPL NDL+ RWG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWG 435
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 370 TDPYGVLPLWRSNDLNLHCRWGE-SCD 447
TDP L WR +DL CRW +CD
Sbjct: 46 TDPTAALSAWRGDDL---CRWPHVACD 69
>03_02_0146 +
5916692-5917931,5918198-5918261,5918836-5919057,
5919626-5919747,5920105-5920170,5920192-5920386,
5920480-5921057,5921818-5921968,5922465-5922715
Length = 962
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 516 VRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 400
VRH L G T G+ R ++ PS+ K+ ++ P
Sbjct: 44 VRHGKLCGKTVGSDGLQKRQRRRSVTPPPSSRKVSLVTP 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,148,106
Number of Sequences: 37544
Number of extensions: 404458
Number of successful extensions: 1184
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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