Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0369
(613 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q960E6 Cluster: SD04748p; n=9; Eukaryota|Rep: SD04748p ... 54 2e-06
UniRef50_Q17D48 Cluster: Valyl-trna synthetase; n=4; Eukaryota|R... 54 4e-06
UniRef50_P49696 Cluster: Valyl-tRNA synthetase; n=8; Deuterostom... 41 0.027
UniRef50_Q6LFC3 Cluster: Putative uncharacterized protein; n=2; ... 38 0.14
UniRef50_P26640 Cluster: Valyl-tRNA synthetase; n=42; Eukaryota|... 37 0.33
UniRef50_Q9X6P5 Cluster: Replication protein; n=3; Bacillus mega... 36 0.57
UniRef50_Q22U56 Cluster: YLP motif family protein; n=2; Tetrahym... 35 1.8
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 34 2.3
UniRef50_Q09F45 Cluster: Ymf70; n=5; Tetrahymena|Rep: Ymf70 - Te... 34 3.1
UniRef50_A4VDS4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_A2FLQ6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4... 33 5.3
UniRef50_A5K7N0 Cluster: ABC transporter, putative; n=2; Plasmod... 33 5.3
UniRef50_Q8DJR3 Cluster: AcrB/AcrD/AcrF family protein; n=1; Syn... 33 7.1
UniRef50_Q4Y5H5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme... 33 7.1
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 33 7.1
UniRef50_A6CC99 Cluster: Probable serine/threonine-protein kinas... 32 9.3
>UniRef50_Q960E6 Cluster: SD04748p; n=9; Eukaryota|Rep: SD04748p -
Drosophila melanogaster (Fruit fly)
Length = 1049
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = -1
Query: 505 AEDYPTKVPVEVQKINPEKLAQSQGEIEKLLSAIETLKLM 386
A DY TKVP EVQ+ N KL++S+ EIE++ +AIETLKLM
Sbjct: 1010 AADYATKVPAEVQEANETKLSESRAEIERIAAAIETLKLM 1049
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -2
Query: 612 HWVLKALIAPQKEIPNLEKKKETFLQTINKLQQAI 508
H +LK L+ KEI L+KK + +QT+ KL QAI
Sbjct: 974 HLLLKGLVEADKEIAKLQKKSDQLVQTVGKLTQAI 1008
>UniRef50_Q17D48 Cluster: Valyl-trna synthetase; n=4; Eukaryota|Rep:
Valyl-trna synthetase - Aedes aegypti (Yellowfever
mosquito)
Length = 1048
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = -1
Query: 568 KFGKEEGNFFANNQQASTGDTAEDYPTKVPVEVQKINPEKLAQSQGEIEKLLSAIETLKL 389
K K++ N + + A DY TKVP EV+ N EKL QS+ EIE++++AIETLK+
Sbjct: 988 KLNKKKDNLSSTVGKLEQAMGAADYETKVPEEVRNNNREKLDQSKIEIERIIAAIETLKM 1047
Query: 388 M 386
M
Sbjct: 1048 M 1048
Score = 36.7 bits (81), Expect = 0.43
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -2
Query: 612 HWVLKALIAPQKEIPNLEKKKETFLQTINKLQQAI 508
H +LK LI KE+ L KKK+ T+ KL+QA+
Sbjct: 973 HLLLKGLIEVDKEVEKLNKKKDNLSSTVGKLEQAM 1007
>UniRef50_P49696 Cluster: Valyl-tRNA synthetase; n=8;
Deuterostomia|Rep: Valyl-tRNA synthetase - Fugu rubripes
(Japanese pufferfish) (Takifugu rubripes)
Length = 1217
Score = 40.7 bits (91), Expect = 0.027
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = -1
Query: 499 DYPTKVPVEVQKINPEKLAQSQGEIEKLLSAIETLKLM 386
DY KVPV+VQ+ + EKL QSQ E+EK+ A++ + M
Sbjct: 1179 DYKEKVPVKVQEQDTEKLRQSQTELEKVKEAMDNFQKM 1216
>UniRef50_Q6LFC3 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 662
Score = 38.3 bits (85), Expect = 0.14
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = -2
Query: 243 FIILMYIFM*HIILYIFTRLFSLFFMYNMVLNVYLC 136
FI + +F ++ +Y+F +FSLFF+ N++ N+ +C
Sbjct: 617 FIFIFCVFTYYLFIYLFIHIFSLFFLINILKNLTIC 652
>UniRef50_P26640 Cluster: Valyl-tRNA synthetase; n=42; Eukaryota|Rep:
Valyl-tRNA synthetase - Homo sapiens (Human)
Length = 1264
Score = 37.1 bits (82), Expect = 0.33
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 505 AEDYPTKVPVEVQKINPEKLAQSQGEIEKLLSAIETLKLM 386
A YP KVP+EVQ+ + KL Q++ E+ K+ AI + M
Sbjct: 1224 ASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1263
>UniRef50_Q9X6P5 Cluster: Replication protein; n=3; Bacillus
megaterium|Rep: Replication protein - Bacillus
megaterium
Length = 428
Score = 36.3 bits (80), Expect = 0.57
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -2
Query: 579 KEIPNLEKKKETFLQTIN---KLQQAILQKIIPQK 484
KE P L KKKE FL+T+ K QQ L K+ P+K
Sbjct: 24 KETPTLRKKKEAFLETLRTYFKQQQEALHKVFPKK 58
>UniRef50_Q22U56 Cluster: YLP motif family protein; n=2; Tetrahymena
thermophila SB210|Rep: YLP motif family protein -
Tetrahymena thermophila SB210
Length = 1916
Score = 34.7 bits (76), Expect = 1.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 232 NVYIYVAHYTLHFYTFIQLVFYV*YGFECIFMLQEVFLLIVKETVIMKPILIVT 71
N+ IY + Y + Q+ Y YG CI ++ +++ IV I+ PI+ +T
Sbjct: 1520 NLQIYATNLQNTIYFYNQIFAYTSYGLICIILIIQIYYSIVLGKYILNPIIHLT 1573
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 34.3 bits (75), Expect = 2.3
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -1
Query: 592 YSPAKGNTKFGKEEGNFFANNQQASTGDTAEDYPTKVPVEVQKINPEKLAQSQGEIEKLL 413
Y G T KE+G + + KVPV+ KINPEKL Q ++E +L
Sbjct: 399 YIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESIL 458
Query: 412 SAIETLK 392
+ + LK
Sbjct: 459 AQDQDLK 465
>UniRef50_Q09F45 Cluster: Ymf70; n=5; Tetrahymena|Rep: Ymf70 -
Tetrahymena paravorax
Length = 89
Score = 33.9 bits (74), Expect = 3.1
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = -1
Query: 319 IDRPKVTNA-TYVMLPRNNVDPLKVRIYYFNV---YIYVAHYTLHFYTFIQLVFYV 164
I + +V++A Y +L NN++ K++I+Y N YIY+ L +T I L+F++
Sbjct: 32 IFKARVSSALAYYILGLNNLELKKLKIFYKNSYFDYIYLKSIPLFLFTIIFLIFFI 87
>UniRef50_A4VDS4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 355
Score = 33.5 bits (73), Expect = 4.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 301 TNATYVMLPRNNVDPLKVRIYYFNVYIYVAHYTLHFYTFIQLV 173
TNA + R N + + YY +YIY+ Y L+ ++FIQ++
Sbjct: 177 TNAILIRFQRLN---MHFQTYYSIIYIYIIQYLLYLFSFIQIL 216
>UniRef50_A2FLQ6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 513
Score = 33.5 bits (73), Expect = 4.0
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 559 KEEGNFFANNQQASTGDTAEDYPTKVPVEVQKINPEKLAQSQGEIEKLLSAIETLK 392
KE N Q++S + +E PT+ P E++ P+K+ + IEKL E+LK
Sbjct: 88 KEAEKVVNNIQESSEEEYSEKAPTEPPKEIEAPKPKKVLGNPELIEKLRKRRESLK 143
>UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4
protein - Plasmodium falciparum
Length = 208
Score = 33.1 bits (72), Expect = 5.3
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 256 LKVRIYYFNVYIYVAHYTLHFYTFIQLVFYV*YGFECIF 140
LK IY +N+YIY+++ L+ Y FI++ Y Y CI+
Sbjct: 146 LKNLIYKYNIYIYISN--LYKYNFIKIYSYNKYFIICIY 182
>UniRef50_A5K7N0 Cluster: ABC transporter, putative; n=2;
Plasmodium|Rep: ABC transporter, putative - Plasmodium
vivax
Length = 2637
Score = 33.1 bits (72), Expect = 5.3
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Frame = -1
Query: 274 RNNVDPLKVRIYYFNVYIYVAHYT-------LHFYTFIQLVFYV*YGFECI-FMLQE--V 125
RN +D KV FNV+ YV HY +++ +I L+F++ Y F+ F+L +
Sbjct: 1671 RNEIDHRKV-FQKFNVHKYV-HYLQILLLEYMYYLIYILLLFFILYVFQYREFVLPSFFL 1728
Query: 124 FLLIVKETVIMKPILIVTLNNQLSLIFYLINYAFC 20
FL++ + L +L ++F +N+ FC
Sbjct: 1729 FLMLYGFNTFLSISLFSSLYLHSYILFVFVNFIFC 1763
>UniRef50_Q8DJR3 Cluster: AcrB/AcrD/AcrF family protein; n=1;
Synechococcus elongatus|Rep: AcrB/AcrD/AcrF family
protein - Synechococcus elongatus (Thermosynechococcus
elongatus)
Length = 1063
Score = 32.7 bits (71), Expect = 7.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 544 FFANNQQASTGDTAEDYPTKVPVEVQKINPEKL 446
F ANN+ GD A P++ P E+Q+IN +++
Sbjct: 791 FSANNRPLRLGDVAHIEPSQAPAEIQRINRQQV 823
>UniRef50_Q4Y5H5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 72
Score = 32.7 bits (71), Expect = 7.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 256 LKVRIYYFNVYIYVAHYTLHFYTFIQLVFYV*YGFEC 146
+++ IYY N++ Y++ +H Y FI FY+ + + C
Sbjct: 27 IRILIYYCNLFWYISFIFIHHY-FILFYFYIPFFYNC 62
>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
maturase - Tetrahymena paravorax
Length = 514
Score = 32.7 bits (71), Expect = 7.1
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = -1
Query: 250 VRIYYFNVYIYVAHYTLHFYTFIQLVFYV*YGFEC-----IFMLQEVFLLIVKETVIMKP 86
++ YY ++I + ++ + FY++ + Y +F++ + + I +I+
Sbjct: 79 IKFYYILIFILIKNFDI-FYSYDYYIITEFYNLNVNLINGLFLIHPILIYIYYALLILLF 137
Query: 85 ILIVTLNNQLSLIFYLINYAFCKKKK 8
I I+++NN FY+ Y K K
Sbjct: 138 IYIISINNYFKNKFYMKKYILNKNLK 163
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1
Query: 487 KVPVEVQKINPEKLAQSQGEIEKLLSAIETLK 392
KVPV+ KINPEKL Q ++E L+ + LK
Sbjct: 435 KVPVKEIKINPEKLIDVQKKLESFLAQDQDLK 466
>UniRef50_A6CC99 Cluster: Probable serine/threonine-protein kinase;
n=1; Planctomyces maris DSM 8797|Rep: Probable
serine/threonine-protein kinase - Planctomyces maris DSM
8797
Length = 763
Score = 32.3 bits (70), Expect = 9.3
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 463 SFALQPALLWDN-LLQYRLLKLVDCLQKSFLLLFQIWYFLLR 585
S AL+P N L+QY L+ LV S LL+F +WYF++R
Sbjct: 699 SMALKPVAEMRNWLIQYGLIVLVT----SCLLIFTVWYFVMR 736
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,220,001
Number of Sequences: 1657284
Number of extensions: 10304551
Number of successful extensions: 32495
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 30539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32303
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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