Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0369
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.29 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.50 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.66 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.66 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   0.88 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       24   0.88 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   3.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -1

Query: 250 VRIYYFNVYIYVAHYTLHFYTFIQLVFYV*YGFECIFMLQEVFLLI 113
           +R+  FN Y  +AHY   F+T   +V +     E + ML+  F+ +
Sbjct: 511 LRVQRFNNYQSLAHYLRVFFTVFNVV-HCYLASELVLMLKNRFVTL 555


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -3

Query: 242 LLF*CIYLCSTLYFTFLHVYSACFLCIIWF*MYIYATRSFFINCKRNCDYETNTYC 75
           LLF C ++  T++  FL       LCI +F   +      +  C+    + T+ YC
Sbjct: 266 LLFCCAFIIFTMHLLFL-------LCIYYFYCALIILLCIYYFCRAFIIFPTHFYC 314



 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 313 YLYFSKCYFHVKILYG*SIYVFVITLVLM 399
           Y Y++   F V +L+   IY FV+ L  +
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFVVPLFFL 143


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 313 YLYFSKCYFHVKILYG*SIYVFVITLVLMFRWRTVASRSR 432
           Y  F+  YF + +L+  +   FV+  +L+ R+R +  + R
Sbjct: 145 YKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLR 184



 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 334 YFHVKILYG-*SIYVFVITLVLMFRWRTV 417
           Y H+ ++ G   IY+ V  +V++F W TV
Sbjct: 243 YLHLAVMLGFQDIYMIVYIIVVIF-WYTV 270


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 313 YLYFSKCYFHVKILYG*SIYVFVITLVLMFRWRTVASRSR 432
           Y  F+  YF + +L+  +   FV+  +L+ R+R +  + R
Sbjct: 145 YKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLR 184



 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 334 YFHVKILYG-*SIYVFVITLVLMFRWRTV 417
           Y H+ ++ G   IY+ V  +V++F W TV
Sbjct: 243 YLHLAVMLGFQDIYMIVYIIVVIF-WYTV 270


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 281 HNISSICNLRSIYIFQNVTSMLKFSMVSLYTCL 379
           H I  IC L +I++  NV ++ K     L   L
Sbjct: 111 HQICHICELHTIFLVCNVLTVFKIRYKDLNKAL 143


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 601 ESPYSPAKGNTKFGKEEGNF 542
           E PY+P +  T +GK E N+
Sbjct: 135 EKPYTPPRLPTVYGKPEQNY 154


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 331 ILKNIDRPKVTNATYVML 278
           IL +IDRP + + TY+ L
Sbjct: 39  ILSSIDRPYLKSYTYIKL 56


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 487 KVPVEVQKINPEKLAQSQ 434
           K PV++ K  PEK  +SQ
Sbjct: 169 KGPVDLSKSEPEKKTESQ 186


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 275 RQHNISSICNLRSIYIFQNVTSML 346
           R HN++++C    I + Q V+  L
Sbjct: 123 RDHNLTTLCQELGISVVQKVSHTL 146


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -1

Query: 133 QEVFLLIVKETVIMKPILIV----TLNNQLSLIFYLINYAFC 20
           +E+  L      I  P+ IV     L+ +L+   ++INYAFC
Sbjct: 242 KEISKLPKSMLAISDPVFIVDQVAALHIKLTDTAHMINYAFC 283


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -1

Query: 133 QEVFLLIVKETVIMKPILIV----TLNNQLSLIFYLINYAFC 20
           +E+  L      I  P+ IV     L+ +L+   ++INYAFC
Sbjct: 242 KEISKLPKSMLAISDPVFIVDQVAALHIKLTDTAHMINYAFC 283


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 610 LGVESPYSPAKGNTKFGKEEGNFF 539
           +GV +PY    GN +F      FF
Sbjct: 290 IGVRAPYLRVGGNKQFEMMADQFF 313


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 610 LGVESPYSPAKGNTKFGKEEGNFF 539
           +GV +PY    GN +F      FF
Sbjct: 297 IGVRAPYLRVGGNKQFEMMADQFF 320


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 440 ISGRDREATVRHRNI 396
           +SG+D E  +++RN+
Sbjct: 111 VSGQDEEKNIKYRNL 125


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 484 LLWDNLLQYRLLKLVDCL 537
           LLW     Y +L +++CL
Sbjct: 204 LLWHTFGYYHILAMLNCL 221


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 484 LLWDNLLQYRLLKLVDCL 537
           LLW     Y +L +++CL
Sbjct: 204 LLWHTFGYYHILAMLNCL 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,598
Number of Sequences: 336
Number of extensions: 3253
Number of successful extensions: 23
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)