Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0368
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   2.8  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   3.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.4  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 50  LLINYPKKLSSQFFYSTSQMGQPLC 124
           LL NY    S +FFY  S++    C
Sbjct: 163 LLANYKVITSDEFFYLVSKIESLAC 187


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 485 TGCCRLIISFSHLANLPGLIFITRVEVLIL*HSGYF 378
           TG    ++   +  N+P  I  +   VL+  H GYF
Sbjct: 49  TGSENCLVLNVYTRNIPDGIHTSLYPVLVWIHGGYF 84


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 408 LNSCYKN*TREIC 446
           +NS Y+N TR++C
Sbjct: 217 VNSLYQNATRKVC 229


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 359 SYFVRWGNNQNVREL 403
           ++FVRW N+Q  R +
Sbjct: 19  TWFVRWLNSQQPRNV 33


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 173 ITTSAETDIRFYSSNKNIKVA 111
           +T S E     YSSNKN+  A
Sbjct: 47  LTESEEKSGGSYSSNKNVSRA 67


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 169 VMQFMYLRHLEKKSASFSQNAP*VFEVKIIS 261
           V +   L HL  K A+F+     +FE+  I+
Sbjct: 254 VQKIQELSHLHYKLANFTVKISGLFEITTIT 284


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 169 VMQFMYLRHLEKKSASFSQNAP*VFEVKIIS 261
           V +   L HL  K A+F+     +FE+  I+
Sbjct: 210 VQKIQELSHLHYKLANFTVKISGLFEITTIT 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,909
Number of Sequences: 336
Number of extensions: 2633
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)