Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0368
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0080 + 10441055-10443856                                         31   0.71 
04_04_0998 - 29996117-29996242,29996345-29996486,29996613-299968...    29   2.2  
04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424...    27   8.8  

>10_06_0080 + 10441055-10443856
          Length = 933

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = -3

Query: 392  HSGYFPNE-----RNMTNKINIVTFSCMYISNQK-TMATLKQSTNLPSGIEIILTSKT*G 231
            H G+FPN      R+M +   +        S Q  T+  L   T +PSGIE++ T K  G
Sbjct: 839  HQGWFPNLKELVLRDMPDLKRLEIHDGAMTSLQDLTLVNLSGLTEVPSGIELLSTLKNLG 898

Query: 230  AFCEKLADFFSRCRR 186
             F E   DF +  R+
Sbjct: 899  -FWEITQDFLAALRQ 912


>04_04_0998 -
           29996117-29996242,29996345-29996486,29996613-29996812,
           29997112-29997497,29997769-29998318,29998949-29999296
          Length = 583

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
 Frame = +3

Query: 129 IRAIKSDVRLCASCN-AIYVSATSRKKI----GEFFA-KCTLSF*SQDYFNA*WKICRLF 290
           I+A+ +DVRLC  C  AI  +A   K +    G+FF  +C  +    D+F+     C+LF
Sbjct: 445 IKALYNDVRLCPKCRMAISKTAGCNKMVCGNCGQFFCFRCGKAIKGYDHFSE----CKLF 500


>04_04_1574 -
           34536744-34537136,34541247-34541405,34541497-34542411,
           34543642-34543731,34544324-34544390,34544483-34544676,
           34544770-34545510,34545596-34545661,34545783-34545908,
           34545978-34546073,34546153-34546521,34546602-34546724,
           34546802-34546906,34547394-34547531,34547665-34547760,
           34548018-34548275
          Length = 1311

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 227 FCEKLADFFSRCRRYINCITTSAETDIRFYSS 132
           F  + AD  S+ +   +C+  S  TD++F  S
Sbjct: 356 FSTRQADLISKAKTICDCLVASENTDLKFEES 387


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,581,427
Number of Sequences: 37544
Number of extensions: 209700
Number of successful extensions: 408
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)