Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0368
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094657-1|AAM11010.1|  503|Drosophila melanogaster AT19250p pro...    30   2.1  
AE014134-748|AAF51005.1|  503|Drosophila melanogaster CG15435-PA...    30   2.1  
AE013599-569|AAF59149.2|  393|Drosophila melanogaster CG8719-PA ...    28   8.4  

>AY094657-1|AAM11010.1|  503|Drosophila melanogaster AT19250p
           protein.
          Length = 503

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 270 WKICRLFQCCHGFLIANIHTGKCDNINFVRHISFVGEITRMLE 398
           WK  +   C   F+  + H    DN    + ++FV E+T++LE
Sbjct: 259 WKERKCPACSKRFMFEDSHQSHLDNCVEYQFVTFVTEVTKLLE 301


>AE014134-748|AAF51005.1|  503|Drosophila melanogaster CG15435-PA
           protein.
          Length = 503

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 270 WKICRLFQCCHGFLIANIHTGKCDNINFVRHISFVGEITRMLE 398
           WK  +   C   F+  + H    DN    + ++FV E+T++LE
Sbjct: 259 WKERKCPACSKRFMFEDSHQSHLDNCVEYQFVTFVTEVTKLLE 301


>AE013599-569|AAF59149.2|  393|Drosophila melanogaster CG8719-PA
           protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 368 VRWGNNQNVRELIPQLVL*KLNPGDLL 448
           V WG + +  + I  L+L  LNPGDLL
Sbjct: 337 VIWGPSCDAMDKISDLLLPNLNPGDLL 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,233,118
Number of Sequences: 53049
Number of extensions: 386762
Number of successful extensions: 534
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)