Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0366
         (632 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34799-4|CAD44130.2|  691|Caenorhabditis elegans Hypothetical pr...    54   6e-08
Z34799-3|CAA84316.3|  539|Caenorhabditis elegans Hypothetical pr...    39   0.003
AF125443-1|AAD12801.1|  783|Caenorhabditis elegans Hypothetical ...    33   0.17 
Z81512-6|CAB04171.3|  455|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z93396-5|CAB07714.1|  633|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical p...    29   3.7  
Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical p...    29   3.7  
Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical pr...    29   3.7  
DQ645956-1|ABG36764.1|  624|Caenorhabditis elegans molting prote...    29   3.7  
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z49937-8|CAD44113.1|  546|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z49867-4|CAD44109.1|  546|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AL032675-1|CAA21779.1|  963|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p...    27   8.4  
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z34799-4|CAD44130.2|  691|Caenorhabditis elegans Hypothetical
           protein F34D10.7 protein.
          Length = 691

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 31/100 (31%), Positives = 51/100 (51%)
 Frame = -1

Query: 566 RNLARSQNSFG*NRITRRRIAQHEDIVEQLAQNYPELLRIGDILERTPLHYAMGVEKIES 387
           + LA +++ FG   +    + +H +IV  +A +Y  +L   D  +RT +HYA        
Sbjct: 478 KKLAIARDRFGCTPLHSAVVHEHTEIVRYIAGHYNSVLNAPDYNKRTAMHYAAAARDGGH 537

Query: 386 LSRVLIKAGAKRVLKDLKGRQPSYYFMNKSDILRLKEEED 267
             ++L KAGA  +  D +GR P YY  N    L+L ++ D
Sbjct: 538 YLKILGKAGADPMAVDNEGRTPDYYRRNAVIDLKLIKDRD 577



 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 28/94 (29%), Positives = 51/94 (54%)
 Frame = -1

Query: 572 DGRNLARSQNSFG*NRITRRRIAQHEDIVEQLAQNYPELLRIGDILERTPLHYAMGVEKI 393
           D + L+  +++ G + + +  + +  DI + L +NYP+ +   D  +RTPLHYA  ++  
Sbjct: 285 DRKKLSLCRDTRGLSPLHKAIVFERTDIAKYLIRNYPQSVNAMDQKKRTPLHYAAALKDG 344

Query: 392 ESLSRVLIKAGAKRVLKDLKGRQPSYYFMNKSDI 291
             L +V+ K+GA   + D  GR   YY  +  +I
Sbjct: 345 GYLYKVMRKSGADPNIYDCNGRPAKYYLKHTGEI 378



 Score = 44.0 bits (99), Expect = 9e-05
 Identities = 24/83 (28%), Positives = 40/83 (48%)
 Frame = -1

Query: 560 LARSQNSFG*NRITRRRIAQHEDIVEQLAQNYPELLRIGDILERTPLHYAMGVEKIESLS 381
           L+ +++++G   I +  +    + V  L   +P  +   D   RTPLHYA      E + 
Sbjct: 95  LSTARDNYGMTPIHKALLHGQTNTVRFLLGRFPSCVNATDHAGRTPLHYAAADPNGEHMI 154

Query: 380 RVLIKAGAKRVLKDLKGRQPSYY 312
           +VL K+G    ++D  G  P YY
Sbjct: 155 KVLQKSGGDAFIEDKHGHTPFYY 177


>Z34799-3|CAA84316.3|  539|Caenorhabditis elegans Hypothetical
           protein F34D10.6 protein.
          Length = 539

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -1

Query: 509 IAQHEDIVEQLAQNYPELLRIGDILERTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLKG 330
           + +  +I+E LA  +P  + + D L RT LHYA   +   ++   L+  GA++ L D  G
Sbjct: 406 LREKHEIIEHLAITFPNQIDLTDTLGRTALHYAACQQ--NAIYDSLVDLGARKDLADQDG 463

Query: 329 RQPSYYFMNKSDILR 285
                Y  N   +LR
Sbjct: 464 ITAEEYRQNPGRLLR 478



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = -1

Query: 500 HEDIVEQLAQNYPELLRIGDILERTPLHYA---MGVEKIESLSRVLIKAGAKRVLKDLKG 330
           H+ IVE +       L + D   RT LHYA    G+ +  ++  +L++ GAK  L D +G
Sbjct: 26  HKSIVEAILGYSLNTLNMHDNDGRTALHYAAALYGLSQDPTMYFLLLEKGAKDNLADSEG 85



 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -1

Query: 431 RTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLKGRQPSYYFMNK 300
           RTPLH+A    + E +  +L        +KD  G+ PS Y + K
Sbjct: 196 RTPLHHAYMKRRNELIEYLLYICPDSANIKDRHGKTPSEYSVVK 239


>AF125443-1|AAD12801.1|  783|Caenorhabditis elegans Hypothetical
           protein H32C10.3 protein.
          Length = 783

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 17/58 (29%), Positives = 32/58 (55%)
 Frame = -1

Query: 494 DIVEQLAQNYPELLRIGDILERTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLKGRQP 321
           DI++ L  +  ++  IG  ++ TPLH+A    +  ++   L+K GA   +K++ G  P
Sbjct: 192 DIIQLLLSHRADINLIGGNMKSTPLHWACYNSQFGAV-MALVKNGADPTIKNINGETP 248


>Z81512-6|CAB04171.3|  455|Caenorhabditis elegans Hypothetical
           protein F25C8.2 protein.
          Length = 455

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -1

Query: 392 ESLSRVLIKAGAKRVLKDLKGRQPSYYFMNKSDILRLKEEEDV 264
           E  S VL K G   +LKD + + P+       +++ +KEEE++
Sbjct: 196 EEDSAVLNKQGFYEILKDFRSKIPAGNIRLNCEVINVKEEENI 238


>Z93396-5|CAB07714.1|  633|Caenorhabditis elegans Hypothetical
           protein ZC15.7 protein.
          Length = 633

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 434 ERTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLKGRQPSYY 312
           +RTPLHYA   +    + + L+  GA+   +D  G  P++Y
Sbjct: 282 QRTPLHYA-AEQGYPEIVKFLLCNGARNSTRDHIGATPAHY 321


>Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical
           protein C27A7.5e protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 574 ETEGT*LGARTHSGRTALHVAV*LN 500
           E  GT +G + +  RTALHVA  LN
Sbjct: 603 EAAGTHMGEKDYDNRTALHVAASLN 627


>Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical
           protein C27A7.5d protein.
          Length = 647

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 574 ETEGT*LGARTHSGRTALHVAV*LN 500
           E  GT +G + +  RTALHVA  LN
Sbjct: 566 EAAGTHMGEKDYDNRTALHVAASLN 590


>Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical
           protein C27A7.5c protein.
          Length = 715

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 574 ETEGT*LGARTHSGRTALHVAV*LN 500
           E  GT +G + +  RTALHVA  LN
Sbjct: 634 EAAGTHMGEKDYDNRTALHVAASLN 658


>Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical
           protein C27A7.5a protein.
          Length = 713

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 574 ETEGT*LGARTHSGRTALHVAV*LN 500
           E  GT +G + +  RTALHVA  LN
Sbjct: 632 EAAGTHMGEKDYDNRTALHVAASLN 656


>DQ645956-1|ABG36764.1|  624|Caenorhabditis elegans molting protein
           MLT-4 protein.
          Length = 624

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 434 ERTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLKGRQPSYY 312
           +RTPLHYA   +    + + L+  GA+   +D  G  P++Y
Sbjct: 282 QRTPLHYA-AEQGYPEIVKFLLCNGARNSTRDHIGATPAHY 321


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 435  GTNSPTLRDGSRKDRVPKSSSNKSWSKTRPQGSQGSTAILL 313
            G  +   R GS+ D   +   +  W +  P G Q +TA +L
Sbjct: 999  GVRNAIARSGSQTDNSERYQFSARWEEDEPNGLQATTAAVL 1039


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 435  GTNSPTLRDGSRKDRVPKSSSNKSWSKTRPQGSQGSTAILL 313
            G  +   R GS+ D   +   +  W +  P G Q +TA +L
Sbjct: 999  GVRNAIARSGSQTDNSERYQFSARWEEDEPNGLQATTAAVL 1039


>Z49937-8|CAD44113.1|  546|Caenorhabditis elegans Hypothetical
           protein C33D3.5 protein.
          Length = 546

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 440 ILERTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLK 333
           I+ R+P++Y M VEKI   S V+   G   +L  LK
Sbjct: 350 IINRSPINYGMDVEKIRENS-VIFYNGISSMLAQLK 384


>Z49867-4|CAD44109.1|  546|Caenorhabditis elegans Hypothetical
           protein C33D3.5 protein.
          Length = 546

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 440 ILERTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLK 333
           I+ R+P++Y M VEKI   S V+   G   +L  LK
Sbjct: 350 IINRSPINYGMDVEKIRENS-VIFYNGISSMLAQLK 384


>AL032675-1|CAA21779.1|  963|Caenorhabditis elegans Hypothetical
           protein VT23B5.1 protein.
          Length = 963

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 5   FSDILKHLLKFRVPSSSLHNYYIENFILNIAERNKCTLKSIKKHSLNQRV 154
           F D+L  L  ++   S LH   +E+F   I +     L+ ++K SL  R+
Sbjct: 27  FEDLLCDLKVWKGAPSELHKMLLEHFYELITDHQLNNLQVVRKSSLLSRI 76


>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
           protein C53B4.4e protein.
          Length = 1544

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 65  YYIENFILNIAERNKC--TLKSIKKHSLNQRVPFYLPIRF 178
           ++ E+F + I++R  C  TLKS K+  L+  +  +   RF
Sbjct: 51  HFFESFFIRISKRTSCSITLKSTKRSFLHFSLRVFFRFRF 90


>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical
           protein C53B4.4b protein.
          Length = 1586

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 65  YYIENFILNIAERNKC--TLKSIKKHSLNQRVPFYLPIRF 178
           ++ E+F + I++R  C  TLKS K+  L+  +  +   RF
Sbjct: 51  HFFESFFIRISKRTSCSITLKSTKRSFLHFSLRVFFRFRF 90


>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical
           protein C53B4.4a protein.
          Length = 1584

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 65  YYIENFILNIAERNKC--TLKSIKKHSLNQRVPFYLPIRF 178
           ++ E+F + I++R  C  TLKS K+  L+  +  +   RF
Sbjct: 51  HFFESFFIRISKRTSCSITLKSTKRSFLHFSLRVFFRFRF 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,417,199
Number of Sequences: 27780
Number of extensions: 257094
Number of successful extensions: 682
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)