Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0364
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AL033508-4|CAE45091.1|  430|Caenorhabditis elegans Hypothetical ...    31   0.52 
L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    31   0.91 
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    31   0.91 
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z50028-5|CAA90338.1|  661|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL032624-4|CAA21522.1|  661|Caenorhabditis elegans Hypothetical ...    28   4.9  
AL032624-1|CAA21521.1|  209|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    28   4.9  
AL032623-11|CAA21505.1|  178|Caenorhabditis elegans Hypothetical...    28   6.4  

>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/65 (33%), Positives = 37/65 (56%)
 Frame = -1

Query: 251 LERREWKAFHQLINSVDSLRKCGRKLPRYCDVNHDSKISITEWMACLEVTQVSQGQTTEV 72
           LER EWK F  ++    ++R+C R L + CD+N D K++  EW  C+ V ++++      
Sbjct: 189 LERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTFDEWRKCI-VQEINRVPAKRP 247

Query: 71  TKLPP 57
            +L P
Sbjct: 248 DQLNP 252



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 570 YARAQCYRSTGYCWCVHQDTG 508
           Y + QCY  + YCWCV + +G
Sbjct: 84  YDKVQCYDVSIYCWCVDELSG 104



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
 Frame = -2

Query: 511 GKPIPGSSVKDRRPDCD------AAPQHASPMRGCPEPTKAAFLKELRSFFASRMTASG 353
           G+P  GSS    +P C+       AP+       C E  +  FL+ L S   S M  SG
Sbjct: 104 GEPKLGSSTTRGKPKCEETPTTTVAPKRVRRNNRCKEKKRTRFLRRLVSTLKSEMIMSG 162


>AL033508-4|CAE45091.1|  430|Caenorhabditis elegans Hypothetical
           protein Y106G6G.6 protein.
          Length = 430

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = -2

Query: 451 QHASPMRGCPEPTKAAFLKELRSFFASRMTASGNGTAP--GDMVKWGASREEQ 299
           Q AS    C E TK  FL  L     S+    G+G  P  G +   GA+R+E+
Sbjct: 163 QTASCSENCSEETKEQFLSSLSQLVQSQADKIGSGWKPLFGSLKAVGAARDEK 215


>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 197 LRKCGRKLPRYCDVNHDSKISITEWMACL 111
           +  C +     CD N+D  ISI EW  CL
Sbjct: 225 MESCIKPFLEGCDANNDGNISIKEWGKCL 253


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 197 LRKCGRKLPRYCDVNHDSKISITEWMACL 111
           +  C +     CD N+D  ISI EW  CL
Sbjct: 225 MESCIKPFLEGCDANNDGNISIKEWGKCL 253


>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
           protein F26C11.3 protein.
          Length = 1317

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -1

Query: 635 WTKQKAGVAALVCTPNALAMNVMLALSATGQLDTVGASTKTRET 504
           W K  A +  L CTPNA     ML  + +    T  +ST    T
Sbjct: 256 WNKANALINLLYCTPNACPQQSMLWTNCSNLSTTTSSSTMLSST 299


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 591  ECTGDERYARAQCYRSTGYCWCVHQDTG 508
            +CT +  + + QC      CWCV + TG
Sbjct: 1499 QCTPEGLFRKYQCDARLNQCWCVDKATG 1526


>Z50028-5|CAA90338.1|  661|Caenorhabditis elegans Hypothetical
           protein F46F6.1a protein.
          Length = 661

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 523 PPRHGKPIPGSSVKDRRPDCDAAP 452
           PP H + IPGSSV+   P   +AP
Sbjct: 558 PPLHPRMIPGSSVQSISPSGSSAP 581


>U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical
           protein T28D9.7 protein.
          Length = 982

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 624 ESRCCRACMYPECTGDERYARAQCYRSTGYCWCVHQDTGNLYLV 493
           +SR    C +P  T  +       + +TG CW ++ D  N Y V
Sbjct: 205 KSRMILGCTWPNGTSCKLSDFKAVWTTTGLCWAINTDPHNPYEV 248


>AL032624-4|CAA21522.1|  661|Caenorhabditis elegans Hypothetical
           protein F46F6.1a protein.
          Length = 661

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 523 PPRHGKPIPGSSVKDRRPDCDAAP 452
           PP H + IPGSSV+   P   +AP
Sbjct: 558 PPLHPRMIPGSSVQSISPSGSSAP 581


>AL032624-1|CAA21521.1|  209|Caenorhabditis elegans Hypothetical
           protein F46F6.1b protein.
          Length = 209

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 523 PPRHGKPIPGSSVKDRRPDCDAAP 452
           PP H + IPGSSV+   P   +AP
Sbjct: 106 PPLHPRMIPGSSVQSISPSGSSAP 129


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = -2

Query: 538  ILLVRPPRHGKPIPGSSVKDRRPDCDAAPQHASPMRGCPEPTKAAFLKELRSFFASRMTA 359
            I  + PP   KP P +S  +        P   +P    P+PT +    +  S  A+ + +
Sbjct: 1120 IQCIEPPPAKKPAPSASAHNLSALGHQKPGPTAPKVTAPKPTTSTASSQAASTMAALLAS 1179

Query: 358  SG 353
            SG
Sbjct: 1180 SG 1181


>AL032623-11|CAA21505.1|  178|Caenorhabditis elegans Hypothetical
           protein Y43F8B.11 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -2

Query: 568 CSRSVLQVNWILLVRPPRHGKPIPGSSVKDRRPDCDAAPQHASPMRGCPEPTKAAFLKE 392
           C  S++++  +L +  P    P+PGS  K     CD A +    +  C E  K   + E
Sbjct: 33  CKGSMIKIQDLLKLYAPYTETPVPGSVFKQISKLCDVAVKCVDQIT-CAEARKGVSMME 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,235,829
Number of Sequences: 27780
Number of extensions: 322885
Number of successful extensions: 1167
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)