Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0362
         (495 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=...    36   0.50 
UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico...    36   0.66 
UniRef50_A7IYF6 Cluster: Gp89; n=1; Corynebacterium phage P1201|...    36   0.66 
UniRef50_A3DEC7 Cluster: Polysaccharide deacetylase precursor; n...    33   2.7  
UniRef50_UPI000051ACB3 Cluster: PREDICTED: similar to CG33456-PA...    33   3.5  
UniRef50_Q7RYM6 Cluster: Predicted protein; n=1; Neurospora cras...    32   6.1  
UniRef50_Q0V2F0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    32   6.1  
UniRef50_Q01053 Cluster: Gene 58 protein; n=3; Herpesviridae|Rep...    32   6.1  
UniRef50_A0UZF2 Cluster: Binding-protein-dependent transport sys...    32   8.1  
UniRef50_Q54XI8 Cluster: Putative uncharacterized protein; n=1; ...    32   8.1  

>UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=6;
           Papilionoideae|Rep: Reverse transcriptase family member
           - Glycine max (Soybean)
          Length = 377

 Score = 35.9 bits (79), Expect = 0.50
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   GRPKKTWMECVNDDMRERGVSVEMTADRE-WKRKTSCADPT 120
           GRPKKT  E +  D+   G+   M  DR  W++    ADPT
Sbjct: 337 GRPKKTIREVIKKDLEINGLDRSMVLDRTLWRKLIHVADPT 377


>UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core
           eudicotyledons|Rep: Polyprotein, putative - Solanum
           demissum (Wild potato)
          Length = 868

 Score = 35.5 bits (78), Expect = 0.66
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 1   GRPKKTWMECVNDDMRERGVSVEMTADR-EWKRKTSCAD 114
           GRPKK W E +  D+    ++ +MT DR EW+ +    D
Sbjct: 653 GRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRIKVED 691


>UniRef50_A7IYF6 Cluster: Gp89; n=1; Corynebacterium phage
           P1201|Rep: Gp89 - Corynebacterium phage P1201
          Length = 86

 Score = 35.5 bits (78), Expect = 0.66
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +1

Query: 340 MYAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
           MY   Y S+LY Y+  F    F  YY LFIFY
Sbjct: 1   MYMYMYISMLYIYVLLFICNLFIFYYLLFIFY 32


>UniRef50_A3DEC7 Cluster: Polysaccharide deacetylase precursor; n=2;
           Clostridium|Rep: Polysaccharide deacetylase precursor -
           Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
          Length = 320

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -1

Query: 309 HSDVFWKFTYNNVYNNKISHTEIAYDAIVNLLVKG 205
           ++++FW F Y++ + +KI   + AYD ++N L  G
Sbjct: 246 YTNLFWSFAYDDWHRDKIRGPQYAYDKVMNNLHNG 280


>UniRef50_UPI000051ACB3 Cluster: PREDICTED: similar to CG33456-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG33456-PA - Apis mellifera
          Length = 664

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = -1

Query: 327 KLALYNHSDVFWKFTYNNVYNNKISHTEIAYDAIVNLLVKGPLRSQKI 184
           K  L +H+DV  K  + N   N IS+T + Y++ +N+L K    +QKI
Sbjct: 329 KHILNSHNDVIKKDCFTNGNRNHISNTVLLYNSSINMLPKILPANQKI 376


>UniRef50_Q7RYM6 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 372

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = -1

Query: 354 IRCVHHQLGKLALYNHSDVFWKFTYNNVYNNKISHTEIAYDAIVNLLVKGPLRSQKIEV 178
           + CVH   G    Y    +  ++ ++     K  + E+ YD ++  ++K  L + K  V
Sbjct: 34  LSCVHEPFGDAFYYGPERMSTRYDHDEAAREKSGYAEVRYDDVMGRILKETLENDKTRV 92


>UniRef50_Q0V2F0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 206

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
           YA YY+   Y Y  ++ + ++  YYY + +Y
Sbjct: 34  YADYYYYYYYYYYYYYYYYYYYYYYYYYYYY 64


>UniRef50_Q01053 Cluster: Gene 58 protein; n=3; Herpesviridae|Rep:
           Gene 58 protein - Saimiriine herpesvirus 2 (strain 11)
           (SaHV-2) (Herpesvirus saimiri)
          Length = 357

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 344 THRIIFLCCILTYNFLNINFLGVIIIYLFFIA 439
           T+ I++LC  +TY +  + FL  +++Y   +A
Sbjct: 122 TYDIVYLCPFITYKYYELGFLNAMLLYYVMVA 153


>UniRef50_A0UZF2 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Clostridium
           cellulolyticum H10|Rep: Binding-protein-dependent
           transport systems inner membrane component - Clostridium
           cellulolyticum H10
          Length = 322

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +1

Query: 172 VSHFDLLTS*RAFNQ*IHNRIVCYLSMRYFIVVNIIVCKLPKN-IGMIVQGELT*LMMYA 348
           + HF+ L +  AF + + N ++  L    F+    IVC +  N I   V  +L    +Y 
Sbjct: 79  LQHFERLFASSAFIKVLFNTLIINLYKILFLFPIPIVCAILLNEIRNKVYRKLAQTAIYV 138

Query: 349 PYYFSLLYTYIQFF 390
           PY+FS + T+  F+
Sbjct: 139 PYFFSWVVTFGIFY 152


>UniRef50_Q54XI8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 267

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 17/56 (30%), Positives = 33/56 (58%)
 Frame = +1

Query: 235 VCYLSMRYFIVVNIIVCKLPKNIGMIVQGELT*LMMYAPYYFSLLYTYIQFFKHKF 402
           + +L + +FI +N+I  K P +I   + G L  + ++   +FS+L T + F K+K+
Sbjct: 158 IIFLILPFFIQLNVIYDKNP-SINTFIVGYLI-IAIFILVWFSILKTLVMFSKYKY 211


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,379,620
Number of Sequences: 1657284
Number of extensions: 8272621
Number of successful extensions: 20634
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20490
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)