Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0362
         (495 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   1.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   6.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.1  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 108 TASFSLPFSISRHLNTHSSFSHI 40
           TAS  LP   ++  NT  SF+H+
Sbjct: 69  TASLPLPGLYTKSANTIRSFTHV 91


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 297 FWKFTYNNVYNNKISHTEIAYDAIVNLLVK 208
           F KF +N V+N++ +     YDA++ +  K
Sbjct: 448 FTKFEFNTVFNDQRTVFANFYDAMICVAYK 477


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 353 IIFLCCILTYNFLNINFLGVI 415
           +IF CC+ T + LN  FL  I
Sbjct: 248 VIFDCCLETVSALNGAFLYTI 268


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 102 SFSLPFSISRHLNTHS 55
           S++ P ++  HL THS
Sbjct: 2   SYARPSTLKTHLRTHS 17


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 102 SFSLPFSISRHLNTHS 55
           S++ P ++  HL THS
Sbjct: 258 SYARPSTLKTHLRTHS 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,472
Number of Sequences: 336
Number of extensions: 2320
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)