Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0362
(495 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011) 34 0.074
SB_11504| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_59039| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_12991| Best HMM Match : TP2 (HMM E-Value=1.4) 31 0.39
SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 30 0.91
SB_33808| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 30 0.91
SB_33679| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 29 2.8
SB_57923| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_44770| Best HMM Match : 7tm_3 (HMM E-Value=3e-06) 28 3.7
SB_55399| Best HMM Match : C1_4 (HMM E-Value=4.8) 28 3.7
SB_13837| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_30892| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
>SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011)
Length = 634
Score = 33.9 bits (74), Expect = 0.074
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 1 GRPKKTWMECVNDDMRERGVSVEMTADR-EWKRKTSCA 111
GRP+K W E + +D++ G++ T DR WK K + A
Sbjct: 588 GRPRKNWHEVLREDLKLAGLTPHDTQDRVRWKLKLNHA 625
>SB_11504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 44
Score = 32.3 bits (70), Expect = 0.23
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 352 YYFSLLYTYIQFFKHKFFRGYYYLFIFYC 438
YY+ Y Y ++ + ++ YYY + +YC
Sbjct: 5 YYYHYYYYYYYYYYYYYYYYYYYYYYYYC 33
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 337 MMYAPYYFSLLYTYIQFFKHKFFRGYYYLFIFYC 438
M Y YY Y Y ++ + ++ YYY + + C
Sbjct: 1 MSYYYYYHYYYYYYYYYYYYYYYYYYYYYYYYCC 34
>SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 31.9 bits (69), Expect = 0.30
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ H ++ YYY + +Y
Sbjct: 114 YYYYYYYYYYYYYYYYYHHYYYYYYYYYYYY 144
Score = 31.9 bits (69), Expect = 0.30
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ H ++ YYY + +Y
Sbjct: 115 YYYYYYYYYYYYYYYYHHYYYYYYYYYYYYY 145
Score = 30.3 bits (65), Expect = 0.91
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 110 YYYYYYYYYYYYYYYYYYYYYHHYYYYYYYY 140
Score = 29.5 bits (63), Expect = 1.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 130 YHHYYYYYYYYYYYYYYYYYYYYYYYYYYYY 160
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 133 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 163
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 134 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 164
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 119 YYYYYYYYYYYYHHYYYYYYYYYYYYYYYYY 149
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 125 YYYYYYHHYYYYYYYYYYYYYYYYYYYYYYY 155
Score = 28.3 bits (60), Expect = 3.7
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 352 YYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 103 YYYYYYYYYYYYYYYYYYYYYYYYYYYY 130
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + + YYY + +Y
Sbjct: 111 YYYYYYYYYYYYYYYYYYYYHHYYYYYYYYY 141
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y + + ++ YYY + +Y
Sbjct: 116 YYYYYYYYYYYYYYYHHYYYYYYYYYYYYYY 146
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y + + ++ YYY + +Y
Sbjct: 118 YYYYYYYYYYYYYHHYYYYYYYYYYYYYYYY 148
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY Y Y ++ + ++ YYY + +Y
Sbjct: 126 YYYYYHHYYYYYYYYYYYYYYYYYYYYYYYY 156
Score = 27.5 bits (58), Expect = 6.4
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
+A YY+ Y Y ++ + ++ YYY + ++
Sbjct: 101 HAYYYYYYYYYYYYYYYYYYYYYYYYYYYYH 131
Score = 27.5 bits (58), Expect = 6.4
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ +YY + +Y
Sbjct: 109 YYYYYYYYYYYYYYYYYYYYYYHHYYYYYYY 139
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 124 YYYYYYYHHYYYYYYYYYYYYYYYYYYYYYY 154
Score = 27.5 bits (58), Expect = 6.4
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y +Y+ Y Y ++ + ++ YYY + +Y
Sbjct: 129 YYHHYYYYYYYYYYYYYYYYYYYYYYYYYYY 159
Score = 27.1 bits (57), Expect = 8.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y + ++ + ++ YYY + +Y
Sbjct: 121 YYYYYYYYYYHHYYYYYYYYYYYYYYYYYYY 151
Score = 27.1 bits (57), Expect = 8.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ + Y ++ + ++ YYY + +Y
Sbjct: 122 YYYYYYYYYHHYYYYYYYYYYYYYYYYYYYY 152
Score = 27.1 bits (57), Expect = 8.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + ++
Sbjct: 135 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYH 165
>SB_59039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 31.5 bits (68), Expect = 0.39
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
YA YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 16 YAYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 46
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 18 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 48
>SB_12991| Best HMM Match : TP2 (HMM E-Value=1.4)
Length = 296
Score = 31.5 bits (68), Expect = 0.39
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ H ++ YYY + +Y
Sbjct: 262 YYYYYYYYYYYYYYYYYHYYYYYYYYYYYYY 292
Score = 31.1 bits (67), Expect = 0.52
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFYC 438
Y YY+ Y Y + + ++ YYY + +YC
Sbjct: 264 YYYYYYYYYYYYYYYHYYYYYYYYYYYYYYYC 295
Score = 30.3 bits (65), Expect = 0.91
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFYCLR 444
Y YY+ Y Y ++ + ++ YYY + +Y R
Sbjct: 263 YYYYYYYYYYYYYYYYHYYYYYYYYYYYYYYYCR 296
Score = 29.5 bits (63), Expect = 1.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 343 YAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
Y YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 261 YYYYYYYYYYYYYYYYYYHYYYYYYYYYYYY 291
Score = 28.7 bits (61), Expect = 2.8
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 352 YYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 260 YYYYYYYYYYYYYYYYYYYHYYYYYYYY 287
>SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
Length = 666
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +1
Query: 1 GRPKKTWMECVNDDMRERGV----SVEMTADR-EWKRKTSCADPT 120
GRPK TW + ++ E G+ ++++ DR EW+ + + PT
Sbjct: 616 GRPKTTWRRTIQAELLEMGLTWGKALKVAKDRQEWRHRVAALFPT 660
>SB_33808| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 280
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +1
Query: 1 GRPKKTWMECVNDDMRERGV----SVEMTADR-EWKRKTSCADPT 120
GRPK TW + ++ E G+ ++++ DR EW+ + + PT
Sbjct: 230 GRPKTTWRRTIQAELLEMGLTWGEALKVAKDRQEWRHRVAALFPT 274
>SB_33679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 29.5 bits (63), Expect = 1.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 1 GRPKKTWMECVNDDMRERGVSVEMTADRE 87
GRP+KTW + D++ G+ + ++R+
Sbjct: 81 GRPRKTWADATLSDLKTAGLKASVASNRK 109
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 353 IIFLCCILTYNFLNINFLGVIIIYLFFIAYV 445
++F + Y FL + F V+ I++FF A+V
Sbjct: 683 VVFAFVVYPYFFLFVVFAFVVFIFIFFFAFV 713
>SB_57923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 151 SSSFSPPYLTKWGRHS*FFSSILYQPSSQH 62
++ F+PP L++ + F S I Y+PSSQH
Sbjct: 139 NNCFTPPVLSRRYDTAFFISFIGYEPSSQH 168
>SB_44770| Best HMM Match : 7tm_3 (HMM E-Value=3e-06)
Length = 155
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 341 CTHRIIFLCCILTYNFLNINFLGVIIIYLFFIAYVDR 451
CTH++I+L C+ TY G+++I+ F+A+ R
Sbjct: 61 CTHKLIWLGCLYTYK-------GLLMIFGLFLAWETR 90
>SB_55399| Best HMM Match : C1_4 (HMM E-Value=4.8)
Length = 335
Score = 28.3 bits (60), Expect = 3.7
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 352 YYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
YY+ Y Y ++ + ++ YYY + +Y
Sbjct: 266 YYYYYYYYYYYYYYYYYYYYYYYYYYYY 293
>SB_13837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +1
Query: 1 GRPKKTWMECVNDDMRERGVSV----EMTAD-REWKRKTSCADPT 120
GRPK TW + ++ E +++ M D R+WKR + PT
Sbjct: 22 GRPKTTWRRTILSELSEHQLTLAEAQHMARDRRKWKRFVAALCPT 66
>SB_30892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 1 GRPKKTWMECVNDDMRERGVSVEMTADREWK-RKT 102
GR + W++ ++ R +E DREWK RKT
Sbjct: 148 GRSDREWLDSQTENGRTERQKMEGQKDREWKDRKT 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,319,775
Number of Sequences: 59808
Number of extensions: 266692
Number of successful extensions: 716
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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