Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0362
         (495 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   3.3  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   3.3  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.6  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    22   10.0 

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 276  NVYNNKISHTEIAYDAIVNLLVKGP 202
            N  NNK+S T +A  A ++ ++ GP
Sbjct: 1664 NSNNNKMSATSMAASAAMHTVLSGP 1688


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 228 SHRMLSQYEIFYCCKHYCM 284
           +HR + ++   YCC H C+
Sbjct: 119 NHR-IDRFSKIYCCSHLCL 136


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/42 (23%), Positives = 23/42 (54%)
 Frame = -1

Query: 378 VSIQQRKIIRCVHHQLGKLALYNHSDVFWKFTYNNVYNNKIS 253
           +S+++R +   +  + GKL  ++ S  F +     ++NN +S
Sbjct: 568 LSVKERVVDLKMKRKCGKLVSFDLSQAFDRVDRGFLFNNMVS 609


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 231 HRMLSQYEIFYCCKHYCM*T 290
           +R + ++   YCC H+ M T
Sbjct: 138 NRRVDRFSKIYCCCHFSMAT 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,768
Number of Sequences: 2352
Number of extensions: 8563
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)