Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0362
         (495 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g59500.1 68418.m07457 expressed protein                             27   6.9  
At1g34340.1 68414.m04262 esterase/lipase/thioesterase family pro...    27   6.9  
At1g06640.2 68414.m00701 2-oxoglutarate-dependent dioxygenase, p...    27   9.2  

>At5g59500.1 68418.m07457 expressed protein
          Length = 396

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 310 IVQGELT*LMMYAPYYFSLLYTYIQFFKHKFFRGYYYLFIF 432
           IV    T L +  P YF+    Y++ + + FF  Y+Y F F
Sbjct: 185 IVTSVFTWLTLVPPAYFN---GYLEGWPYVFFLAYHYFFFF 222


>At1g34340.1 68414.m04262 esterase/lipase/thioesterase family
           protein similar to late embryogenesis abundant protein
           (EMB8) GI:1350544 SP|Q40863 from (Picea glauca);
           contains Interpro entry IPR000379
           esterase/lipase/thioesterase family
          Length = 530

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 353 IIFLCCILTYNFLNINFLGVIIIYLF 430
           +  LC I  YNF+  +FLG  I+  F
Sbjct: 32  LFVLCTIFFYNFVEFHFLGDAILRYF 57


>At1g06640.2 68414.m00701 2-oxoglutarate-dependent dioxygenase,
           putative similar to 2A6 (GI:599622) and tomato ethylene
           synthesis regulatory protein E8 (SP|P10967); contains
           Pfam profile: PF00671 Iron/Ascorbate oxidoreductase
           family
          Length = 322

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 298 NIGMIVQGELT*LMMYAPYYFSLLYTYIQFFKHKFFRGYYYLFIFY 435
           NIG ++Q  L    M+A   F+ L+T +  FK      ++ +F F+
Sbjct: 279 NIGDLLQASLRNQYMFASSDFTSLFTMLDLFKKS--SSWFKVFFFF 322


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,969,342
Number of Sequences: 28952
Number of extensions: 187992
Number of successful extensions: 361
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 868578304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)