Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0358
(514 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3K146 Cluster: LysM domain protein; n=1; Sagittula ste... 36 0.54
UniRef50_Q2QGD7 Cluster: Zinc finger protein ZXDC; n=48; Eumetaz... 36 0.54
UniRef50_Q4SAD4 Cluster: Chromosome 19 SCAF14691, whole genome s... 35 0.95
UniRef50_A5NMZ6 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q5TZA2 Cluster: Rootletin; n=40; Amniota|Rep: Rootletin... 34 1.7
UniRef50_UPI0000F2C16A Cluster: PREDICTED: hypothetical protein;... 33 2.9
UniRef50_Q0E002 Cluster: Os02g0587300 protein; n=4; Oryza sativa... 33 3.8
UniRef50_UPI0000E21429 Cluster: PREDICTED: hypothetical protein;... 33 5.0
UniRef50_Q27W72 Cluster: NigAIII; n=1; Streptomyces violaceusnig... 33 5.0
UniRef50_Q8N7I6 Cluster: CDNA FLJ25506 fis, clone CBR05185; n=1;... 33 5.0
UniRef50_UPI0000E25800 Cluster: PREDICTED: similar to Transcript... 32 6.7
UniRef50_A5NRT3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.7
UniRef50_Q5VS46 Cluster: Putative uncharacterized protein P0425F... 32 6.7
UniRef50_Q3HKQ0 Cluster: Male accessory gland protein; n=2; Dros... 32 8.8
UniRef50_Q4SVN5 Cluster: DNA topoisomerase; n=3; Tetraodontidae|... 27 9.1
>UniRef50_A3K146 Cluster: LysM domain protein; n=1; Sagittula
stellata E-37|Rep: LysM domain protein - Sagittula
stellata E-37
Length = 598
Score = 35.9 bits (79), Expect = 0.54
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = +2
Query: 218 ESLPSGWLILGARVSPARVAVPGGTDAQXXXXXXXXXXDEPST*TRPGCAVPG----PAD 385
ES+P+G L A S R A PGG D D+P A PG PAD
Sbjct: 331 ESVPAGEL---ASFSAPRPATPGGLDLASTSGSAPVATDDPEAPPSVATAEPGAPAMPAD 387
Query: 386 ATSPHSPDTCGLALVGPQDQAPTTLDTANPDS 481
A +P + + +D AP +T P +
Sbjct: 388 AAAPAGTPSAQDTDIASRDPAPQPDETGAPQA 419
>UniRef50_Q2QGD7 Cluster: Zinc finger protein ZXDC; n=48;
Eumetazoa|Rep: Zinc finger protein ZXDC - Homo sapiens
(Human)
Length = 858
Score = 35.9 bits (79), Expect = 0.54
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Frame = -2
Query: 498 FLVTFQLS-GLAVSSVVGAWSWGPTS----ASPQVSGECGEVASAGPGTAQPGRVYVEXX 334
FLV ++ G A + G+ P S AS G G A+ GPG A G V +
Sbjct: 75 FLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAAPGPGVAPAGAVTISSQ 134
Query: 333 XXXXXXXXXXGCASVPPGTAT--RAGLTRAPKISHP 232
S PPG AT A RAP+ S P
Sbjct: 135 DLLVRLDRGVLALSAPPGPATAGAAAPRRAPQASGP 170
>UniRef50_Q4SAD4 Cluster: Chromosome 19 SCAF14691, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 19 SCAF14691, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1400
Score = 35.1 bits (77), Expect = 0.95
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 333 TSPQRRPALAAPCQGPLTP 389
TSP RRP+L PC+GPL+P
Sbjct: 886 TSPVRRPSLLMPCEGPLSP 904
>UniRef50_A5NMZ6 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 198
Score = 34.3 bits (75), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 450 GAWSWGPTSASPQVSGECGEVASAGPGTAQPGR 352
G +SWG A+P G V++ GPG A GR
Sbjct: 34 GRFSWGARKATPAAKGPADGVSACGPGNAGAGR 66
>UniRef50_Q5TZA2 Cluster: Rootletin; n=40; Amniota|Rep: Rootletin -
Homo sapiens (Human)
Length = 2017
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 245 LGARVSPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 409
LG SPA VPG + PST PG P P ATSP SPD
Sbjct: 1446 LGRAPSPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1501
>UniRef50_UPI0000F2C16A Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 166
Score = 33.5 bits (73), Expect = 2.9
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 350 TRPG--CAVPGPADATSPHSPDTCGLALVGPQDQAP 451
+RPG C P PA ++ P +P + G +L GP AP
Sbjct: 23 SRPGLPCLPPDPASSSQPPTPGSSGSSLQGPDSPAP 58
>UniRef50_Q0E002 Cluster: Os02g0587300 protein; n=4; Oryza
sativa|Rep: Os02g0587300 protein - Oryza sativa subsp.
japonica (Rice)
Length = 122
Score = 33.1 bits (72), Expect = 3.8
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +1
Query: 145 TKSLIVGQFFLCQVQLNYQDSAVN*KPTQWVAYFGSTGESGACGSAGRNGRTA---RP-R 312
+K L+V L A N +PT A GS G++G +AG NG++A P
Sbjct: 3 SKGLVVFALLLLAAAFLATSEAANSQPTYPPANGGSDGQAGGSSAAGGNGKSAGYVAPYY 62
Query: 313 PSPRCWRRALNVDPP 357
P P W PP
Sbjct: 63 PGPWWWPNGGGFYPP 77
>UniRef50_UPI0000E21429 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 227
Score = 32.7 bits (71), Expect = 5.0
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = -2
Query: 444 WSWGPTSASPQVSGECGEVASAGPGTAQPGRV--YVEXXXXXXXXXXXXGCASVPPGTAT 271
W+ P +A PQ + + GT QP + E CAS PPG T
Sbjct: 138 WAKYPETADPQGPSTSSKPPAPALGTLQPAHAWRHPETGSCLLPSGRGGSCASSPPG-GT 196
Query: 270 RAGLTRAPKISHPLGRLS 217
G T+ + HP LS
Sbjct: 197 STGGTKPREFHHPPDALS 214
>UniRef50_Q27W72 Cluster: NigAIII; n=1; Streptomyces
violaceusniger|Rep: NigAIII - Streptomyces violaceoniger
Length = 4083
Score = 32.7 bits (71), Expect = 5.0
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 371 PGPADATSPHSPDTCGLALVGPQDQAPTTLD-TANPD 478
P P SP P T AL+GP+DQAP D A+PD
Sbjct: 1277 PYPISVDSP--PRTASWALIGPRDQAPAAPDLPAHPD 1311
>UniRef50_Q8N7I6 Cluster: CDNA FLJ25506 fis, clone CBR05185; n=1;
Homo sapiens|Rep: CDNA FLJ25506 fis, clone CBR05185 -
Homo sapiens (Human)
Length = 243
Score = 32.7 bits (71), Expect = 5.0
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 232 WVAYFGSTGESGACGSAGRNGRTARPRP--SPRCWRRALNVDPP 357
W+ G G G G G + ARP P RCWR PP
Sbjct: 2 WICPGGGGGGGGGGGGGGGDREDARPAPLCCGRCWRSGCAARPP 45
>UniRef50_UPI0000E25800 Cluster: PREDICTED: similar to Transcription
factor COE4 (Early B-cell factor 4) (EBF-4)
(Olf-1/EBF-like 4) (OE-4) (O/E-4), partial; n=1; Pan
troglodytes|Rep: PREDICTED: similar to Transcription
factor COE4 (Early B-cell factor 4) (EBF-4)
(Olf-1/EBF-like 4) (OE-4) (O/E-4), partial - Pan
troglodytes
Length = 355
Score = 32.3 bits (70), Expect = 6.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 265 GACGSAGRNGRTARPRPSPRCW-RRALNVDP 354
G G RNG RPRPS R W A+ VDP
Sbjct: 267 GRSGDGERNGTQPRPRPSQRGWGAGAVRVDP 297
>UniRef50_A5NRT3 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 144
Score = 32.3 bits (70), Expect = 6.7
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 265 GACGSAGRNGRTARPRPSPRCWR 333
G C SA R R RPRPSPR R
Sbjct: 104 GKCSSASRGRRCRRPRPSPRTCR 126
>UniRef50_Q5VS46 Cluster: Putative uncharacterized protein
P0425F02.22; n=3; Oryza sativa|Rep: Putative
uncharacterized protein P0425F02.22 - Oryza sativa
subsp. japonica (Rice)
Length = 227
Score = 32.3 bits (70), Expect = 6.7
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 247 GSTGESGACGSAGRNGRTARPRPSPR 324
GST G GSAGR+GR PR +PR
Sbjct: 151 GSTIVGGVDGSAGRSGRRGPPRAAPR 176
>UniRef50_Q3HKQ0 Cluster: Male accessory gland protein; n=2;
Drosophila melanogaster|Rep: Male accessory gland
protein - Drosophila melanogaster (Fruit fly)
Length = 415
Score = 31.9 bits (69), Expect = 8.8
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +2
Query: 206 PPSTESLPSGWLILGARVSPARVAVPGGTDAQXXXXXXXXXXDEPST*TRPGCAVPGPAD 385
PPS S P+GW G+ + P + GT Q P++ +PG + PG +
Sbjct: 206 PPS--SAPAGWSSPGSPIPPPSLPGLPGTPDQNPWGSADRPAHPPASPIQPGWSPPGSSF 263
Query: 386 ATSPHS 403
SP S
Sbjct: 264 PPSPQS 269
>UniRef50_Q4SVN5 Cluster: DNA topoisomerase; n=3;
Tetraodontidae|Rep: DNA topoisomerase - Tetraodon
nigroviridis (Green puffer)
Length = 984
Score = 27.5 bits (58), Expect(2) = 9.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 241 YFGSTGESGACGSAGRNGRTARPRPSP 321
YF + G G G+ G N R +RP P P
Sbjct: 727 YFRAGGSGGGAGNGGSNARPSRP-PVP 752
Score = 23.0 bits (47), Expect(2) = 9.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 415 WTSASGPPRPG 447
WT GPP+PG
Sbjct: 754 WTPRPGPPQPG 764
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,179,335
Number of Sequences: 1657284
Number of extensions: 11537466
Number of successful extensions: 36629
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 33993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36550
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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